More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_5493 on replicon NC_011368
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011368  Rleg2_5493  binding-protein-dependent transport systems inner membrane component  100 
 
 
276 aa  537  9.999999999999999e-153  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.173525 
 
 
-
 
NC_004311  BRA0306  sugar ABC transporter, permease protein  81.09 
 
 
275 aa  451  1.0000000000000001e-126  Brucella suis 1330  Bacteria  normal  0.147324  n/a   
 
 
-
 
NC_009668  Oant_2942  binding-protein-dependent transport systems inner membrane component  81.45 
 
 
275 aa  450  1e-125  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.667129  n/a   
 
 
-
 
NC_009620  Smed_3810  binding-protein-dependent transport systems inner membrane component  81.88 
 
 
276 aa  429  1e-119  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4440  binding-protein-dependent transport systems inner membrane component  70 
 
 
277 aa  386  1e-106  Paracoccus denitrificans PD1222  Bacteria  normal  0.062682  normal 
 
 
-
 
NC_009654  Mmwyl1_0023  binding-protein-dependent transport systems inner membrane component  70.37 
 
 
277 aa  386  1e-106  Marinomonas sp. MWYL1  Bacteria  normal  0.275556  normal  0.424969 
 
 
-
 
NC_007005  Psyr_0760  binding-protein dependent transport system inner membrane protein  65.79 
 
 
280 aa  360  1e-98  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0312496  normal  0.789995 
 
 
-
 
NC_007963  Csal_0260  binding-protein-dependent transport systems inner membrane component  65.2 
 
 
280 aa  360  1e-98  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0887  sugar ABC transporter, permease protein  65.79 
 
 
280 aa  359  2e-98  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.453961  n/a   
 
 
-
 
NC_013440  Hoch_3144  binding-protein-dependent transport systems inner membrane component  68.61 
 
 
283 aa  351  7e-96  Haliangium ochraceum DSM 14365  Bacteria  normal  0.657095  normal  0.345018 
 
 
-
 
NC_009832  Spro_2524  binding-protein-dependent transport systems inner membrane component  63.64 
 
 
281 aa  332  4e-90  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3327  binding-protein-dependent transport systems inner membrane component  60.37 
 
 
278 aa  306  3e-82  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013946  Mrub_2088  binding-protein-dependent transport systems inner membrane component  55.39 
 
 
282 aa  283  2.0000000000000002e-75  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00655693  normal  0.897951 
 
 
-
 
NC_009620  Smed_4398  binding-protein-dependent transport systems inner membrane component  50.74 
 
 
292 aa  276  4e-73  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.445244 
 
 
-
 
NC_008025  Dgeo_0589  binding-protein-dependent transport systems inner membrane component  57.78 
 
 
283 aa  268  8e-71  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.288724  normal 
 
 
-
 
NC_010003  Pmob_0029  binding-protein-dependent transport systems inner membrane component  49.82 
 
 
283 aa  262  4e-69  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000511748  n/a   
 
 
-
 
NC_013525  Tter_0399  binding-protein-dependent transport systems inner membrane component  49.64 
 
 
286 aa  260  1e-68  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_0956  binding-protein-dependent transport systems inner membrane component  48.2 
 
 
278 aa  257  1e-67  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0972  binding-protein-dependent transport systems inner membrane component  48.2 
 
 
278 aa  257  1e-67  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00136246  n/a   
 
 
-
 
NC_011899  Hore_20850  binding-protein-dependent transport systems inner membrane component  48.57 
 
 
288 aa  252  6e-66  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1818  binding-protein-dependent transport systems inner membrane component  47.94 
 
 
279 aa  249  3e-65  Thermosipho melanesiensis BI429  Bacteria  normal  0.675174  n/a   
 
 
-
 
NC_010320  Teth514_0395  binding-protein-dependent transport systems inner membrane component  47.1 
 
 
277 aa  245  4.9999999999999997e-64  Thermoanaerobacter sp. X514  Bacteria  normal  0.230637  n/a   
 
 
-
 
NC_008541  Arth_3685  binding-protein-dependent transport systems inner membrane component  45.72 
 
 
299 aa  236  2e-61  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0448  binding-protein-dependent transport systems inner membrane component  47.65 
 
 
281 aa  228  6e-59  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0280  ABC transporter, inner membrane subunit  44.62 
 
 
280 aa  224  1e-57  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.787211  n/a   
 
 
-
 
NC_008726  Mvan_2542  binding-protein-dependent transport systems inner membrane component  42.55 
 
 
275 aa  223  2e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.607728  normal 
 
 
-
 
NC_013947  Snas_1043  binding-protein-dependent transport systems inner membrane component  42.96 
 
 
273 aa  222  4e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  decreased coverage  0.00118636  normal  0.712976 
 
 
-
 
NC_009338  Mflv_3853  binding-protein-dependent transport systems inner membrane component  42.18 
 
 
275 aa  221  9e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0623628 
 
 
-
 
NC_013947  Snas_4646  binding-protein-dependent transport systems inner membrane component  44.49 
 
 
273 aa  218  7.999999999999999e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00194673 
 
 
-
 
NC_013093  Amir_0809  binding-protein-dependent transport systems inner membrane component  41.85 
 
 
281 aa  218  8.999999999999998e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2795  binding-protein-dependent transport systems inner membrane component  40.81 
 
 
298 aa  217  1e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2957  binding-protein-dependent transport systems inner membrane component  42.54 
 
 
275 aa  214  9.999999999999999e-55  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_4615  binding-protein-dependent transport systems inner membrane component  42.31 
 
 
295 aa  214  1.9999999999999998e-54  Frankia sp. EAN1pec  Bacteria  normal  0.60944  normal 
 
 
-
 
NC_014158  Tpau_1201  binding-protein-dependent transport systems inner membrane component  42.31 
 
 
277 aa  208  7e-53  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06510  carbohydrate ABC transporter membrane protein  39.26 
 
 
282 aa  208  8e-53  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1097  binding-protein-dependent transport systems inner membrane component  40.51 
 
 
280 aa  205  7e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal 
 
 
-
 
NC_011729  PCC7424_1897  binding-protein-dependent transport systems inner membrane component  40.3 
 
 
291 aa  202  5e-51  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.3984100000000001e-18 
 
 
-
 
NC_013757  Gobs_3932  binding-protein-dependent transport systems inner membrane component  40.68 
 
 
277 aa  201  9.999999999999999e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.410983  n/a   
 
 
-
 
NC_012803  Mlut_04600  ABC-type sugar transport system, permease component  40 
 
 
295 aa  201  9.999999999999999e-51  Micrococcus luteus NCTC 2665  Bacteria  normal  0.539803  n/a   
 
 
-
 
NC_014151  Cfla_0962  binding-protein-dependent transport systems inner membrane component  40.46 
 
 
277 aa  198  7e-50  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0871909  hitchhiker  0.000355781 
 
 
-
 
NC_009664  Krad_1115  binding-protein-dependent transport systems inner membrane component  39.27 
 
 
280 aa  197  1.0000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.565272 
 
 
-
 
NC_013441  Gbro_1868  binding-protein-dependent transport systems inner membrane component  39.48 
 
 
276 aa  193  3e-48  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_20470  carbohydrate ABC transporter membrane protein  42.44 
 
 
289 aa  191  1e-47  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0780045  normal  0.389193 
 
 
-
 
NC_009664  Krad_4017  binding-protein-dependent transport systems inner membrane component  42.01 
 
 
313 aa  190  2e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0409938  normal  0.173322 
 
 
-
 
NC_011886  Achl_0625  binding-protein-dependent transport systems inner membrane component  41.57 
 
 
298 aa  189  2.9999999999999997e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008243  Meso_4515  binding-protein-dependent transport systems inner membrane component  38.58 
 
 
275 aa  187  2e-46  Chelativorans sp. BNC1  Bacteria  normal  0.275064  n/a   
 
 
-
 
NC_008541  Arth_0415  binding-protein-dependent transport systems inner membrane component  41.95 
 
 
298 aa  187  2e-46  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3995  binding-protein-dependent transport systems inner membrane component  40 
 
 
278 aa  186  4e-46  Mycobacterium sp. JLS  Bacteria  normal  0.273063  normal  0.368954 
 
 
-
 
NC_008146  Mmcs_3981  binding-protein-dependent transport systems inner membrane component  40 
 
 
278 aa  186  5e-46  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4055  binding-protein-dependent transport systems inner membrane component  40 
 
 
278 aa  186  5e-46  Mycobacterium sp. KMS  Bacteria  normal  normal  0.898469 
 
 
-
 
NC_009565  TBFG_11262  sugar-transport integral membrane protein ABC transporter sugB  39.26 
 
 
274 aa  185  6e-46  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00203297 
 
 
-
 
NC_009636  Smed_0188  binding-protein-dependent transport systems inner membrane component  40.15 
 
 
277 aa  185  7e-46  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2308  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
283 aa  182  6e-45  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000390677  n/a   
 
 
-
 
NC_011368  Rleg2_5474  binding-protein-dependent transport systems inner membrane component  38.55 
 
 
280 aa  180  2e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.9066  normal  0.435889 
 
 
-
 
NC_012848  Rleg_5211  binding-protein-dependent transport systems inner membrane component  38.91 
 
 
281 aa  180  2e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.610418 
 
 
-
 
NC_009675  Anae109_1695  binding-protein-dependent transport systems inner membrane component  44.78 
 
 
267 aa  179  2.9999999999999997e-44  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.071417  normal 
 
 
-
 
NC_013521  Sked_02950  carbohydrate ABC transporter membrane protein  38.61 
 
 
297 aa  178  8e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0948  permease protein of sugar ABC transporter  40.39 
 
 
275 aa  177  2e-43  Synechococcus elongatus PCC 7942  Bacteria  normal  0.845711  normal 
 
 
-
 
NC_013124  Afer_1329  binding-protein-dependent transport systems inner membrane component  40.91 
 
 
279 aa  177  2e-43  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5696  binding-protein-dependent transport systems inner membrane component  37.64 
 
 
283 aa  174  1.9999999999999998e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.697019  normal  0.0828938 
 
 
-
 
NC_013093  Amir_0401  binding-protein-dependent transport systems inner membrane component  39.54 
 
 
273 aa  172  3.9999999999999995e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1989  binding-protein-dependent transport systems inner membrane component  43.48 
 
 
284 aa  172  3.9999999999999995e-42  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.951557  n/a   
 
 
-
 
NC_012858  Rleg_6792  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
285 aa  172  7.999999999999999e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2192  putative sugar ABC transporter, permease protein  38.35 
 
 
283 aa  171  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3672  ABC sugar transporter, inner membrane subunit  34.23 
 
 
277 aa  169  5e-41  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.191343  n/a   
 
 
-
 
NC_009050  Rsph17029_3407  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
277 aa  169  5e-41  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.353789  normal  0.790416 
 
 
-
 
NC_008010  Dgeo_2694  binding-protein-dependent transport systems inner membrane component  37.4 
 
 
279 aa  167  2e-40  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0498  binding-protein-dependent transport systems inner membrane component  36.29 
 
 
307 aa  167  2e-40  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4287  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
293 aa  167  2e-40  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3334  binding-protein-dependent transport systems inner membrane component  35.88 
 
 
299 aa  166  2.9999999999999998e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_4265  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
293 aa  164  1.0000000000000001e-39  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3353  binding-protein-dependent transport systems inner membrane component  37.91 
 
 
299 aa  164  1.0000000000000001e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0952  binding-protein-dependent transport systems inner membrane component  35.13 
 
 
271 aa  163  3e-39  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4134  ABC sugar transporter, inner membrane subunit  39.66 
 
 
295 aa  162  4.0000000000000004e-39  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0549  ABC-type sugar / sn-glycerol-3-phosphate transport system permease protein ugpE  33.46 
 
 
272 aa  162  4.0000000000000004e-39  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1418  binding-protein-dependent transport systems inner membrane component  35.41 
 
 
276 aa  162  7e-39  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4749  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
294 aa  161  1e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.377096 
 
 
-
 
NC_013205  Aaci_2235  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
276 aa  160  2e-38  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4664  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
294 aa  160  3e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.829969 
 
 
-
 
NC_011988  Avi_6239  ABC transporter membrane spanning protein (maltose)  37.96 
 
 
286 aa  160  3e-38  Agrobacterium vitis S4  Bacteria  normal  0.152867  n/a   
 
 
-
 
NC_011831  Cagg_0404  binding-protein-dependent transport systems inner membrane component  34.56 
 
 
281 aa  159  4e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_00800  binding-protein-dependent transport systems inner membrane component  35.52 
 
 
280 aa  159  5e-38  Halothermothrix orenii H 168  Bacteria  normal  0.303025  n/a   
 
 
-
 
NC_011899  Hore_19870  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
285 aa  159  6e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2099  binding-protein dependent transport system inner membrane protein  33.33 
 
 
307 aa  158  1e-37  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.642563  decreased coverage  0.0000998416 
 
 
-
 
NC_008010  Dgeo_2818  binding-protein-dependent transport systems inner membrane component  39.31 
 
 
255 aa  158  1e-37  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1881  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
277 aa  157  2e-37  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.31192  normal  0.345507 
 
 
-
 
NC_009620  Smed_4643  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
285 aa  156  3e-37  Sinorhizobium medicae WSM419  Bacteria  normal  0.210049  normal  0.0503947 
 
 
-
 
NC_007925  RPC_3644  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
306 aa  156  4e-37  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.433095 
 
 
-
 
NC_007958  RPD_3320  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
306 aa  156  4e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.516891  normal 
 
 
-
 
NC_014165  Tbis_1103  binding-protein-dependent transporter inner membrane component  37.74 
 
 
283 aa  155  5.0000000000000005e-37  Thermobispora bispora DSM 43833  Bacteria  normal  0.216355  normal  0.105298 
 
 
-
 
NC_007947  Mfla_2350  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
272 aa  155  6e-37  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.531176 
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
285 aa  155  6e-37  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_010505  Mrad2831_2890  binding-protein-dependent transport systems inner membrane component  32.72 
 
 
312 aa  155  7e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal  0.323454 
 
 
-
 
NC_013202  Hmuk_0942  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
280 aa  155  9e-37  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.41482 
 
 
-
 
NC_011830  Dhaf_2632  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
281 aa  155  9e-37  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1415  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
292 aa  154  1e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2899  binding-protein-dependent transport systems inner membrane component  32.6 
 
 
316 aa  154  1e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008578  Acel_0554  binding-protein-dependent transport systems inner membrane component  36.72 
 
 
296 aa  154  2e-36  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0749  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
306 aa  153  2.9999999999999998e-36  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00175385 
 
 
-
 
NC_013525  Tter_1289  binding-protein-dependent transport systems inner membrane component  37.27 
 
 
271 aa  152  5e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
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