| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2548 |
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| Symbol | |
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| ID | 3910337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2923132 |
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| End bp | 2924046 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637884446 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_486163 |
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| Protein GI | 86749667 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00362276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCGA CACTGACGAT CGACAAGGCC GCGCCACGGC GCAATCCGGG CTACGGCAGC
ATGAGCCGCG ACCGCGCCTG GGCGCTGAAA TGGTCGTATT TCTTTCTGAC GATCTTCGCG
ATTTTCTCGC TGGTGCCGCC GCTCTACATG CTGATCACCT CGCTGAAGAG CAGCCAGGAG
ATCTCGGCGG CGACCAATCC GTGGTGGGTG TTCCACCCGA CGCTCGGCAA TTACATCCAG
TTGCTGACCT CGAACCAGTT CCTGACGTTC TTCTTCAATT CGGCGATGGT GTCGATCTTC
GTCGTCACCA TCACCATGCT GATCAGCGTG CCGGCGGCGT TCGCGCTGGC GCGGATGCGG
TTCTGGGGCT CGGCAACGCT CGCCACCGGC GTGTTCCTGA CCTATCTGAT CCCGGACACG
TTGCTGTTCA TTCCGCTGTT CAAGATGTTC GCCACGTTCG GCGACTGGAG CGGCATCCAG
TTGATCAACC GCTGGTACGT GCTGTTGATC ATCTATCCGA CCCTGACGGT GCCGTTCTGC
ACCTGGATCA TGATCGGCTA TTTCGCCTCG ATCCCGAAGG AGCTGGACGA GGCTGCGATC
ATCGACGGCG CGTCGTGGTT CCAGACGCTG ACGCGGATCT TCATTCCGGT GGCGCTGCCC
GGCATCATCG CCGCGACGAT CTTCGCCTTC ACCGTGTCCT GGGCGCAGTT CCTGTATCCC
CTGGTGTTCA CCACCTCGAC CGATCAGCTG GTGCTGCCGG TCGGCATCAT CACCACGCTG
ATCAAGGGCG ACGTGTTCAA CTGGGGGCAG ATCATGACCG GCGCGCTGCT CGGCGCCGCG
CCGCCTTTGA TCATCTACGC GTTTTTGATG GATTACTACA TCGCGGGGCT CACCGCGGGC
GCAACGAAAG GGTGA
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| Protein sequence | MASTLTIDKA APRRNPGYGS MSRDRAWALK WSYFFLTIFA IFSLVPPLYM LITSLKSSQE
ISAATNPWWV FHPTLGNYIQ LLTSNQFLTF FFNSAMVSIF VVTITMLISV PAAFALARMR
FWGSATLATG VFLTYLIPDT LLFIPLFKMF ATFGDWSGIQ LINRWYVLLI IYPTLTVPFC
TWIMIGYFAS IPKELDEAAI IDGASWFQTL TRIFIPVALP GIIAATIFAF TVSWAQFLYP
LVFTTSTDQL VLPVGIITTL IKGDVFNWGQ IMTGALLGAA PPLIIYAFLM DYYIAGLTAG
ATKG
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