Gene Rsph17025_3582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3582 
Symbol 
ID5085734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp470935 
End bp471771 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID640485140 
Producthypothetical protein 
Protein accessionYP_001169756 
Protein GI146279598 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.928396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.804079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGGG GCAATCCCTG GCTCTACATG CTGTTCTGGG TCTTTGTCAG CTTCCTGACG 
CTGTTCCCGA TCTACTGGCT GTTCGTGATC TCGGTGAAGC CGGCGGTGGA CCTGTTCTCG
ACGCCCGAGA TCCTGCTGAA GGACATCTAC TGGCAGAACT ACATCGACGT GCTGAACGAC
CGCACCCTGC GCAGCTACAT GGTCAATTCG CTGATCATCT CGTCGGGCAA TGCGCTGCTC
TGCACCACGC TCGGGTTCTT CGCCTGCTAT GCCCTCTCGC GTTACGACAT GAGCGGGAAG
GAATCGATCT TCTTCTGGAC CATCACCAAC CGCATGGCGC CGCCCGCGGT GTTCCTGCTG
CCGCTGTTCC TCCTGATGAC GCAGGTCTAT CGTTTCGGCG ACTTCACGCT GCTCGACACG
CGGATCGGCA TGATCCTTGT CTATTGCACC TTCAACCTGC CGTTCGCGAT CTGGACGCTG
CGCCCCACGC TCGACGGTAT CCCCAAGGAG CTGGACGAGG CCGCCTATGT CGATGGCGCA
AGCCCCTGGA AGGTCATCAC CGAGGTGGTC TTTCCGCTCT GCCGGCCCGG CCTTGCGGTG
ACGCTGATCC TGACCTGGGT CTTCGCCTGG AACGAATATC TGCTGGCGGC GACGCTGACG
AACTTCAACG CCCGCACGCT GACCACCGGC CTTTCGGAAT ATGTGACCAC GACCGGCACC
GAATGGGGGA TCATGGCCGC CATCTCGATG TTCACGCTGA TCCCGGCGCT GATCGTCTTC
AGCCTGGTGC AGAAGCATAT CGTGACCGGT CTGACCTTCG GCGCGGTGAA AGGATAG
 
Protein sequence
MQRGNPWLYM LFWVFVSFLT LFPIYWLFVI SVKPAVDLFS TPEILLKDIY WQNYIDVLND 
RTLRSYMVNS LIISSGNALL CTTLGFFACY ALSRYDMSGK ESIFFWTITN RMAPPAVFLL
PLFLLMTQVY RFGDFTLLDT RIGMILVYCT FNLPFAIWTL RPTLDGIPKE LDEAAYVDGA
SPWKVITEVV FPLCRPGLAV TLILTWVFAW NEYLLAATLT NFNARTLTTG LSEYVTTTGT
EWGIMAAISM FTLIPALIVF SLVQKHIVTG LTFGAVKG