Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3582 |
Symbol | |
ID | 5085734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 470935 |
End bp | 471771 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640485140 |
Product | hypothetical protein |
Protein accession | YP_001169756 |
Protein GI | 146279598 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.928396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.804079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAGGG GCAATCCCTG GCTCTACATG CTGTTCTGGG TCTTTGTCAG CTTCCTGACG CTGTTCCCGA TCTACTGGCT GTTCGTGATC TCGGTGAAGC CGGCGGTGGA CCTGTTCTCG ACGCCCGAGA TCCTGCTGAA GGACATCTAC TGGCAGAACT ACATCGACGT GCTGAACGAC CGCACCCTGC GCAGCTACAT GGTCAATTCG CTGATCATCT CGTCGGGCAA TGCGCTGCTC TGCACCACGC TCGGGTTCTT CGCCTGCTAT GCCCTCTCGC GTTACGACAT GAGCGGGAAG GAATCGATCT TCTTCTGGAC CATCACCAAC CGCATGGCGC CGCCCGCGGT GTTCCTGCTG CCGCTGTTCC TCCTGATGAC GCAGGTCTAT CGTTTCGGCG ACTTCACGCT GCTCGACACG CGGATCGGCA TGATCCTTGT CTATTGCACC TTCAACCTGC CGTTCGCGAT CTGGACGCTG CGCCCCACGC TCGACGGTAT CCCCAAGGAG CTGGACGAGG CCGCCTATGT CGATGGCGCA AGCCCCTGGA AGGTCATCAC CGAGGTGGTC TTTCCGCTCT GCCGGCCCGG CCTTGCGGTG ACGCTGATCC TGACCTGGGT CTTCGCCTGG AACGAATATC TGCTGGCGGC GACGCTGACG AACTTCAACG CCCGCACGCT GACCACCGGC CTTTCGGAAT ATGTGACCAC GACCGGCACC GAATGGGGGA TCATGGCCGC CATCTCGATG TTCACGCTGA TCCCGGCGCT GATCGTCTTC AGCCTGGTGC AGAAGCATAT CGTGACCGGT CTGACCTTCG GCGCGGTGAA AGGATAG
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Protein sequence | MQRGNPWLYM LFWVFVSFLT LFPIYWLFVI SVKPAVDLFS TPEILLKDIY WQNYIDVLND RTLRSYMVNS LIISSGNALL CTTLGFFACY ALSRYDMSGK ESIFFWTITN RMAPPAVFLL PLFLLMTQVY RFGDFTLLDT RIGMILVYCT FNLPFAIWTL RPTLDGIPKE LDEAAYVDGA SPWKVITEVV FPLCRPGLAV TLILTWVFAW NEYLLAATLT NFNARTLTTG LSEYVTTTGT EWGIMAAISM FTLIPALIVF SLVQKHIVTG LTFGAVKG
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