| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0644 |
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| Symbol | |
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| ID | 5170774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 648981 |
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| End bp | 649832 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563151 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001244240 |
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| Protein GI | 148269780 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000450076 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TCCTGACCAT CGTGAGATAC ATTCTGATCG CCGTTTGTTT GATATTTTTT
CTTTTTCCCG TTTACTGGCT TGTGATCACG GCTTTCAAGC CTTCAAACGA GTGGTTCACC
ATGCCTCCTA GATTCTTTCC GACAAGACCC ACCCTTTCCA ACTTCTTTGG AACAAAGGAG
ACAGAAGTTT TCGGCGGAAC AACCGGTTCT ATTGAAAACA TCTTTCCGTA CTTGAGAAAC
AGTATAGTGG TTGGTGTCTC TGTAGCACTC ATAGGAACGG TGATCAGTGC CCTCGCTGCC
TACGCTATAG CCCGCTACAG GGTAGGAGGT CCGTTCTTGG CGGAGTGGAT CATCTCCATC
AGAATGCTCC CACCTATTGT GTCAGCTGTT CCCCTGTACG TGATATTCAC GAAACTGAGA
CTCATCAACA CCTGGTGGGC TCTCATTCTG TCACATCTTG TTATAGTCGT GCCTCTTGGA
GTCTGGCTCC TTATCAGCTT TTTCAGAGAG ATTCCAAGGG AGATAGATGA AGCGGCCTAT
GTAGATGGAG CTACTCCCTT TCAAACGTTC TTCTACGTGA TTCTTCCACT CAGTGCCCCA
GGACTCGCAG CGGTTGCAGT ACTTTCTCTC ATTCAAAGCT GGGGAGAGTT CCTTCTGGCT
CTTGTTTTAA CGAACGATGC ACGTGCTCAA ACGTTACCCA TTTTCCTTGG GAGATACATC
ACTGGCTGGA GAGTTGCCTG GGGACCACTT TCCGCGGCCG GTATAGTCAC CTTGCTTCCC
GTTGTGATTT TCGCTCTTGT TGCCCAGAGA TATCTAATCA GAGGTCTCAC CTTCGGCGCG
GTGAAGGGAT AG
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| Protein sequence | MKKILTIVRY ILIAVCLIFF LFPVYWLVIT AFKPSNEWFT MPPRFFPTRP TLSNFFGTKE
TEVFGGTTGS IENIFPYLRN SIVVGVSVAL IGTVISALAA YAIARYRVGG PFLAEWIISI
RMLPPIVSAV PLYVIFTKLR LINTWWALIL SHLVIVVPLG VWLLISFFRE IPREIDEAAY
VDGATPFQTF FYVILPLSAP GLAAVAVLSL IQSWGEFLLA LVLTNDARAQ TLPIFLGRYI
TGWRVAWGPL SAAGIVTLLP VVIFALVAQR YLIRGLTFGA VKG
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