More than 300 homologs were found in PanDaTox collection
for query gene Pput_1390 on replicon NC_009512
Organism: Pseudomonas putida F1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  92.13 
 
 
521 aa  977    Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  98.66 
 
 
521 aa  1044    Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  70.34 
 
 
521 aa  723    Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  69.29 
 
 
521 aa  724    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  100 
 
 
534 aa  1086    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3735  PAS  68.52 
 
 
521 aa  713    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  97.12 
 
 
521 aa  1030    Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  48.8 
 
 
521 aa  492  9.999999999999999e-139  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  50.38 
 
 
521 aa  493  9.999999999999999e-139  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  50 
 
 
521 aa  489  1e-137  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  50 
 
 
521 aa  491  1e-137  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.19 
 
 
521 aa  486  1e-136  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  50.19 
 
 
521 aa  488  1e-136  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3406  PAS  50.28 
 
 
521 aa  483  1e-135  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.62 
 
 
521 aa  482  1e-135  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  49.72 
 
 
521 aa  475  1e-133  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  49.43 
 
 
521 aa  475  1e-133  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  48.37 
 
 
522 aa  473  1e-132  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.82 
 
 
521 aa  471  1.0000000000000001e-131  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  51.67 
 
 
521 aa  465  1e-129  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  51.3 
 
 
521 aa  463  1e-129  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  47.78 
 
 
524 aa  446  1.0000000000000001e-124  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
515 aa  429  1e-119  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.94 
 
 
527 aa  410  1e-113  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  42.53 
 
 
527 aa  387  1e-106  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.15 
 
 
523 aa  388  1e-106  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  48.03 
 
 
419 aa  380  1e-104  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  39.77 
 
 
518 aa  360  3e-98  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.69 
 
 
524 aa  349  6e-95  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.38 
 
 
521 aa  344  2e-93  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.2 
 
 
524 aa  342  7e-93  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.06 
 
 
526 aa  342  1e-92  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.6 
 
 
524 aa  341  2e-92  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  41.9 
 
 
531 aa  340  4e-92  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  41.62 
 
 
529 aa  339  7e-92  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.2 
 
 
524 aa  338  9.999999999999999e-92  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
524 aa  338  9.999999999999999e-92  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  37.31 
 
 
524 aa  334  2e-90  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.31 
 
 
524 aa  334  3e-90  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  37.31 
 
 
524 aa  334  3e-90  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  38.45 
 
 
524 aa  333  6e-90  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  35.58 
 
 
520 aa  331  2e-89  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  37.8 
 
 
524 aa  329  6e-89  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  36.77 
 
 
524 aa  328  1.0000000000000001e-88  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.55 
 
 
523 aa  324  2e-87  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
522 aa  304  2.0000000000000002e-81  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.72 
 
 
522 aa  304  3.0000000000000004e-81  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
522 aa  303  7.000000000000001e-81  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  35.73 
 
 
513 aa  300  3e-80  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  36.98 
 
 
522 aa  299  1e-79  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  36.4 
 
 
522 aa  296  5e-79  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  36.7 
 
 
538 aa  296  5e-79  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  37.66 
 
 
532 aa  294  2e-78  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  37.5 
 
 
516 aa  292  9e-78  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.97 
 
 
516 aa  291  2e-77  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.52 
 
 
522 aa  291  3e-77  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  37.45 
 
 
517 aa  288  2e-76  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  34.56 
 
 
518 aa  288  2e-76  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.33 
 
 
522 aa  286  7e-76  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.33 
 
 
522 aa  286  8e-76  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  35.62 
 
 
532 aa  283  7.000000000000001e-75  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.3 
 
 
556 aa  281  2e-74  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  33.01 
 
 
511 aa  281  3e-74  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.39 
 
 
575 aa  280  4e-74  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  36.69 
 
 
520 aa  277  3e-73  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  36.01 
 
 
523 aa  273  7e-72  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.57 
 
 
517 aa  272  9e-72  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.2 
 
 
550 aa  272  1e-71  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.63 
 
 
522 aa  271  2e-71  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.44 
 
 
522 aa  271  2e-71  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  34.73 
 
 
583 aa  271  2.9999999999999997e-71  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  35.74 
 
 
565 aa  271  2.9999999999999997e-71  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.44 
 
 
522 aa  271  2.9999999999999997e-71  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.12 
 
 
519 aa  270  4e-71  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_003296  RSp1224  aerotaxis sensor receptor transmembrane protein  36.01 
 
 
514 aa  269  8.999999999999999e-71  Ralstonia solanacearum GMI1000  Bacteria  normal  0.229455  normal  0.54431 
 
 
-
 
NC_010524  Lcho_1520  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.1 
 
 
543 aa  269  8.999999999999999e-71  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.112151 
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  36.33 
 
 
549 aa  263  4.999999999999999e-69  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.41 
 
 
551 aa  263  6.999999999999999e-69  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.85 
 
 
598 aa  262  1e-68  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  33.82 
 
 
623 aa  261  2e-68  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.15 
 
 
566 aa  261  3e-68  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A2845  methyl-accepting chemotaxis protein  34.94 
 
 
526 aa  260  3e-68  Yersinia pestis Angola  Bacteria  normal  normal  0.208852 
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  33.82 
 
 
669 aa  260  4e-68  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.85 
 
 
520 aa  260  5.0000000000000005e-68  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1618  methyl-accepting chemotaxis protein  34.94 
 
 
526 aa  260  6e-68  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1726  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.94 
 
 
526 aa  259  6e-68  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  33.82 
 
 
580 aa  259  1e-67  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  33.82 
 
 
580 aa  259  1e-67  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  33.82 
 
 
580 aa  259  1e-67  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  35.25 
 
 
532 aa  258  1e-67  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.52 
 
 
514 aa  258  1e-67  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  33.82 
 
 
580 aa  259  1e-67  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  33.82 
 
 
583 aa  258  2e-67  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0674  PAS  35.03 
 
 
544 aa  258  2e-67  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.86 
 
 
566 aa  258  2e-67  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  33.51 
 
 
514 aa  258  2e-67  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_010002  Daci_2372  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.19 
 
 
579 aa  258  3e-67  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0268  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
514 aa  256  6e-67  Burkholderia sp. 383  Bacteria  normal  normal  0.723346 
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
522 aa  255  1.0000000000000001e-66  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3295  methyl-accepting chemotaxis sensory transducer  35.16 
 
 
519 aa  254  3e-66  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
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