More than 300 homologs were found in PanDaTox collection
for query gene Gbro_4498 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_4498  binding-protein-dependent transport systems inner membrane component  100 
 
 
285 aa  537  9.999999999999999e-153  Gordonia bronchialis DSM 43247  Bacteria  normal  0.886344  n/a   
 
 
-
 
NC_014158  Tpau_1969  binding-protein-dependent transport systems inner membrane component  72.52 
 
 
266 aa  354  7.999999999999999e-97  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.451413  n/a   
 
 
-
 
NC_009338  Mflv_0117  binding-protein-dependent transport systems inner membrane component  70.99 
 
 
281 aa  332  5e-90  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0983595 
 
 
-
 
NC_013169  Ksed_03990  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  58.1 
 
 
277 aa  250  2e-65  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.518636  normal  0.0983545 
 
 
-
 
NC_014165  Tbis_0308  binding-protein-dependent transporter inner membrane component  41.63 
 
 
298 aa  186  5e-46  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3037  binding-protein-dependent transport systems inner membrane component  42.98 
 
 
289 aa  177  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1273  binding-protein-dependent transport systems inner membrane component  36.22 
 
 
286 aa  159  4e-38  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1862  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
283 aa  159  6e-38  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1327  dipeptide ABC transporter, permease protein  37.45 
 
 
276 aa  155  8e-37  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0037  binding-protein-dependent transport systems inner membrane component  35.24 
 
 
289 aa  151  1e-35  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00200044  n/a   
 
 
-
 
NC_007412  Ava_C0013  binding-protein dependent transport system inner membrane protein  36.84 
 
 
292 aa  150  2e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  0.943696  normal  0.0118376 
 
 
-
 
NC_013515  Smon_1467  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
273 aa  149  5e-35  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013204  Elen_2201  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
353 aa  148  1.0000000000000001e-34  Eggerthella lenta DSM 2243  Bacteria  normal  0.26861  normal 
 
 
-
 
NC_011830  Dhaf_0329  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
287 aa  148  1.0000000000000001e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0189  oligopeptide ABC transporter, permease protein  30.77 
 
 
273 aa  147  3e-34  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_007410  Ava_B0214  binding-protein dependent transport system inner membrane protein  33.6 
 
 
291 aa  145  7.0000000000000006e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0197  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
275 aa  145  1e-33  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007963  Csal_3001  binding-protein-dependent transport systems inner membrane component  37.84 
 
 
299 aa  144  1e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.499686  n/a   
 
 
-
 
NC_011830  Dhaf_2552  binding-protein-dependent transport systems inner membrane component  34.76 
 
 
271 aa  142  6e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3840  binding-protein-dependent transport systems inner membrane component  34.89 
 
 
298 aa  140  3e-32  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.00781305  normal  0.217965 
 
 
-
 
NC_004311  BRA1093  peptide ABC transporter, permease protein, putative  35.51 
 
 
296 aa  137  2e-31  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2494  binding-protein-dependent transport systems inner membrane component  33.64 
 
 
399 aa  135  8e-31  Natrialba magadii ATCC 43099  Archaea  normal  0.02594  n/a   
 
 
-
 
NC_007355  Mbar_A1343  dipeptide ABC transporter, permease protein  33.33 
 
 
285 aa  133  3e-30  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.384157 
 
 
-
 
NC_008752  Aave_0937  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
315 aa  133  3e-30  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1299  binding-protein-dependent transport systems inner membrane component  36.56 
 
 
303 aa  132  3.9999999999999996e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_16510  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  35.04 
 
 
321 aa  132  6e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.341434  normal  0.69344 
 
 
-
 
NC_011312  VSAL_I1948  oligopeptide transport system permease protein C  32.96 
 
 
300 aa  132  7.999999999999999e-30  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2114  binding-protein-dependent transport systems inner membrane component  35.65 
 
 
326 aa  132  9e-30  Polaromonas sp. JS666  Bacteria  normal  0.230342  normal  0.0495653 
 
 
-
 
NC_010718  Nther_2788  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
310 aa  132  9e-30  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4111  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
299 aa  131  1.0000000000000001e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.553979  n/a   
 
 
-
 
NC_007948  Bpro_0424  binding-protein-dependent transport systems inner membrane component  37.21 
 
 
281 aa  131  1.0000000000000001e-29  Polaromonas sp. JS666  Bacteria  normal  0.170759  normal 
 
 
-
 
NC_013421  Pecwa_4400  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
299 aa  131  1.0000000000000001e-29  Pectobacterium wasabiae WPP163  Bacteria  normal  0.111328  n/a   
 
 
-
 
NC_008639  Cpha266_1676  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
494 aa  131  1.0000000000000001e-29  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0921  binding-protein-dependent transport systems inner membrane component  37.6 
 
 
284 aa  131  1.0000000000000001e-29  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.399737 
 
 
-
 
NC_012918  GM21_1592  binding-protein-dependent transport systems inner membrane component  36.41 
 
 
280 aa  130  3e-29  Geobacter sp. M21  Bacteria  n/a    normal  0.961775 
 
 
-
 
NC_011146  Gbem_2642  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
280 aa  130  3e-29  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2716  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
301 aa  129  4.0000000000000003e-29  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0137  binding-protein-dependent transport systems inner membrane component  37.34 
 
 
300 aa  129  5.0000000000000004e-29  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1157  peptide ABC transporter, permease protein, putative  33.94 
 
 
473 aa  129  5.0000000000000004e-29  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0420  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
307 aa  129  5.0000000000000004e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_009668  Oant_3090  binding-protein-dependent transport systems inner membrane component  34.89 
 
 
310 aa  129  6e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2032  binding-protein-dependent transport systems inner membrane component  35.65 
 
 
285 aa  129  6e-29  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1074  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
283 aa  129  6e-29  Jannaschia sp. CCS1  Bacteria  normal  0.28217  normal  0.161189 
 
 
-
 
NC_012791  Vapar_5233  binding-protein-dependent transport systems inner membrane component  37.38 
 
 
283 aa  129  7.000000000000001e-29  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3250  dipeptide ABC transporter, permease protein DppC, putative  34.63 
 
 
301 aa  127  1.0000000000000001e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.193894  n/a   
 
 
-
 
NC_007498  Pcar_1867  ABC-type transport system protein  37.02 
 
 
288 aa  127  1.0000000000000001e-28  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_1343  peptide ABC transporter, permease protein, putative  33.94 
 
 
479 aa  128  1.0000000000000001e-28  Chlorobium luteolum DSM 273  Bacteria  normal  0.736839  normal 
 
 
-
 
NC_011060  Ppha_1644  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
485 aa  128  1.0000000000000001e-28  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.431647  n/a   
 
 
-
 
NC_008528  OEOE_0843  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  28.85 
 
 
337 aa  128  1.0000000000000001e-28  Oenococcus oeni PSU-1  Bacteria  normal  0.0217859  n/a   
 
 
-
 
NC_012880  Dd703_0144  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
298 aa  128  1.0000000000000001e-28  Dickeya dadantii Ech703  Bacteria  normal  0.0407535  n/a   
 
 
-
 
NC_007802  Jann_4129  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
312 aa  127  2.0000000000000002e-28  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2642  binding-protein-dependent transport systems inner membrane component  34.56 
 
 
310 aa  127  2.0000000000000002e-28  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4476  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
323 aa  126  3e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.837371  normal  0.176841 
 
 
-
 
NC_013456  VEA_002961  oligopeptide transport system permease protein OppC  34.24 
 
 
300 aa  127  3e-28  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0862  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
301 aa  127  3e-28  Maricaulis maris MCS10  Bacteria  normal  0.69178  normal 
 
 
-
 
NC_011830  Dhaf_0455  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
309 aa  127  3e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5372  binding-protein-dependent transport systems inner membrane component  37.4 
 
 
279 aa  126  4.0000000000000003e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.194033 
 
 
-
 
NC_013739  Cwoe_2947  binding-protein-dependent transport systems inner membrane component  35.55 
 
 
300 aa  126  4.0000000000000003e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.456335  normal  0.0430362 
 
 
-
 
NC_009457  VC0395_A0611  oligopeptide ABC transporter, permease protein  32.58 
 
 
300 aa  125  5e-28  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02947  hypothetical protein  32.96 
 
 
302 aa  125  6e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008254  Meso_1833  binding-protein-dependent transport systems inner membrane component  38.18 
 
 
299 aa  125  6e-28  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1236  binding-protein dependent transport system inner membrane protein  34.58 
 
 
284 aa  125  7e-28  Geobacter metallireducens GS-15  Bacteria  normal  0.143707  normal  0.209567 
 
 
-
 
NC_009952  Dshi_0882  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
322 aa  125  7e-28  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.838286 
 
 
-
 
NC_011004  Rpal_1658  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
303 aa  125  8.000000000000001e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.11217  n/a   
 
 
-
 
NC_013223  Dret_1359  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
308 aa  125  9e-28  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0236512  normal  0.473156 
 
 
-
 
NC_010002  Daci_1242  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
312 aa  125  9e-28  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1435  peptide ABC transporter, permease protein  35 
 
 
282 aa  125  1e-27  Geobacter sulfurreducens PCA  Bacteria  normal  0.557175  n/a   
 
 
-
 
NC_013159  Svir_19890  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  35.96 
 
 
289 aa  124  1e-27  Saccharomonospora viridis DSM 43017  Bacteria  hitchhiker  0.00186711  hitchhiker  0.000357505 
 
 
-
 
NC_010803  Clim_1543  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
496 aa  124  1e-27  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3991  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
300 aa  125  1e-27  Dickeya zeae Ech1591  Bacteria  normal  0.368526  n/a   
 
 
-
 
NC_009635  Maeo_0510  binding-protein-dependent transport systems inner membrane component  29.02 
 
 
270 aa  125  1e-27  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009485  BBta_2532  putative ABC transporter  33.91 
 
 
299 aa  124  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.803269 
 
 
-
 
NC_013205  Aaci_2260  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
295 aa  125  1e-27  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.00197888  n/a   
 
 
-
 
NC_004116  SAG0150  oligopeptide ABC transporter, permease protein  29.55 
 
 
343 aa  124  2e-27  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1684  binding-protein-dependent transport systems inner membrane component  32.33 
 
 
312 aa  124  2e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_0983  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
495 aa  124  2e-27  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.99676  normal  0.0550466 
 
 
-
 
NC_009524  PsycPRwf_0023  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
301 aa  124  2e-27  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3219  binding-protein-dependent transport systems inner membrane component  35.45 
 
 
279 aa  124  2e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.511198  normal 
 
 
-
 
NC_013411  GYMC61_2745  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
313 aa  124  2e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_3865  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
307 aa  124  2e-27  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0590  binding-protein dependent transport system inner membrane protein  33.47 
 
 
302 aa  123  3e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.305304  n/a   
 
 
-
 
NC_011989  Avi_2696  ABC transporter membrane spanning protein (agrocinopine)  31.16 
 
 
288 aa  123  3e-27  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1494  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
497 aa  123  3e-27  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.826633 
 
 
-
 
NC_013739  Cwoe_5013  binding-protein-dependent transport systems inner membrane component  33.07 
 
 
304 aa  124  3e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.125727 
 
 
-
 
NC_013456  VEA_001972  peptide ABC transporter permease component  31.14 
 
 
318 aa  123  3e-27  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3535  binding-protein-dependent transport systems inner membrane component  33.74 
 
 
300 aa  123  3e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.641847 
 
 
-
 
NC_008825  Mpe_A3119  IM pore protein  33.91 
 
 
312 aa  124  3e-27  Methylibium petroleiphilum PM1  Bacteria  normal  0.141306  normal  0.0623657 
 
 
-
 
NC_007947  Mfla_1485  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
274 aa  123  4e-27  Methylobacillus flagellatus KT  Bacteria  normal  0.0146821  normal  0.125484 
 
 
-
 
NC_009783  VIBHAR_00495  ABC transporter permease component  31.58 
 
 
318 aa  123  4e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008709  Ping_0564  peptide ABC transporter, protein inner membrane binding component  30.3 
 
 
314 aa  123  4e-27  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4252  binding-protein-dependent transport systems inner membrane component  34.86 
 
 
276 aa  123  4e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.176316  normal  0.343929 
 
 
-
 
NC_009664  Krad_3861  binding-protein-dependent transport systems inner membrane component  35.44 
 
 
359 aa  122  5e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.61209  hitchhiker  0.00385009 
 
 
-
 
NC_013441  Gbro_0269  ABC transporter related protein  32.69 
 
 
867 aa  122  5e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4371  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
291 aa  122  5e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.532821  normal 
 
 
-
 
NC_011981  Avi_7616  nickel transporter permease NikC  34.52 
 
 
291 aa  122  5e-27  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2802  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
300 aa  122  6e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1216  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
279 aa  122  6e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7028  ABC transporter membrane spanning protein (oligopeptide)  30.18 
 
 
308 aa  122  6e-27  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_1253  binding-protein-dependent transport systems inner membrane component  28.9 
 
 
305 aa  122  7e-27  Aciduliprofundum boonei T469  Archaea  normal  0.95778  n/a   
 
 
-
 
NC_009380  Strop_4338  binding-protein-dependent transport systems inner membrane component  35.68 
 
 
300 aa  122  7e-27  Salinispora tropica CNB-440  Bacteria  normal  0.244803  normal  0.769148 
 
 
-
 
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