| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1074 |
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| Symbol | |
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| ID | 3933518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1035385 |
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| End bp | 1036236 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637903422 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_509016 |
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| Protein GI | 89053565 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.28217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.161189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACA GCACCCAGCC CCTCCGCGTC GGCCCCGCGA TCCCGCTCAG CGTCAAACTC
GCATTGGGGT TCGTGGGGAT CTTCGTGCTG TTCGCCCTGT TCGGTCATCT GCTGACGCCC
CACGGGTTCC GCGAAACGTC GCTCATGCAC CGGTTGGAGC CGCCCGGCAC CGACGGCTAC
CTGCTCGGCA CGGATGCCCG GGGGCGGGAC CTCTTCGCCC GTCTGGTGAC CGGGGCGCAG
ATCACCCTGG TCGTGGCCAT CGTGGGCACC GTGATCGGGG CGGCTCTCGG CTCACTTCTG
GGGATCGTGG CCGCCGCCCA ACGGGGCCGG ACCGAAGCCG TGATCGTGGC GGCCATTGAT
GTGCAGGCGT CCCTGCCGAT CATCATCGTC GCGCTCTTCA TGCTGGCGAT GTTCGACAAT
TCCTTCACGC TGTTCCTGCT TCTTGTCGGC CTCAATGGGT GGGAGGTTTA TGCCCGCCTT
ATGCGCGGGG CGACGCTACA GGCCAAGGAA TCCGGCTATG TCACCGCCGT CCGCGCCCTG
GGGGCCACGC CTGCGCGGAT CTACCTGCGC CACGTCCTGC CCAACATCCT CAACATCGCG
CTGGTGCAGT TCACCGTGAA CCTGCCCCTG ACTATCCTGC TGGAAACCGC CCTGTCGTTT
CTGGGCCTTG GCGTGCAGCC GCCCCTGACC AGTCTGGGTC AGATCATGTC CGAGGGGCGC
GACCGCCTGA TGACCGCCTG GTGGCTGACC CTTCTTCCCG GCGCGATCAT CTTCTGCCTC
GCGCTCTCGG TCTCGATGAT CGGCGACTGG CTGCGCGACC GGCTTGACCC GACGTTGCGG
AGTGAACGAT GA
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| Protein sequence | MTDSTQPLRV GPAIPLSVKL ALGFVGIFVL FALFGHLLTP HGFRETSLMH RLEPPGTDGY
LLGTDARGRD LFARLVTGAQ ITLVVAIVGT VIGAALGSLL GIVAAAQRGR TEAVIVAAID
VQASLPIIIV ALFMLAMFDN SFTLFLLLVG LNGWEVYARL MRGATLQAKE SGYVTAVRAL
GATPARIYLR HVLPNILNIA LVQFTVNLPL TILLETALSF LGLGVQPPLT SLGQIMSEGR
DRLMTAWWLT LLPGAIIFCL ALSVSMIGDW LRDRLDPTLR SER
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