Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1543 |
Symbol | |
ID | 6354190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1663055 |
End bp | 1664545 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642669149 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001943572 |
Protein GI | 189347043 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAACC GAAACACCAC GAACACAACA AGAAAGCAAA GAACATTGCC GATCTACCAT CTTATCCCCG GAATTGGCCT TATCAGCAGG AAAAAACGAG GACTGGGCTT TTTTCTTTTT TTCTCGTTTA TGATCTACCT GTTTATCCTG ATGCTGCAGG GAGACCTTGT CGTTATCAGT TTCCGATCTC TGGTTTCCGC GACGTCGCTT ATTCTCCTTT CGCCTGAGAA ACTCCGCGAA GTTTTCAGTA TCGAAATTAT TGAGTTCTGG ATTGCGTCCA TCGCTGTTAT CGCTGTTCCC ATAGCACTCT TCATGGTTTC CAAAAAAACG GTTGCCGAAG AATCGCAACA AAAAGAAGGA GAGAACCGGC ACGCATCGAG CCTTGGAAGA ATCAGTCTTC AGGCGTTCAT GCACAACACC ATTGCCCAGA GCGCAGCCGT CGTGATCTTC GTACTCTATT CTGTGGCCTT TCTCGCGCCC TTTCTCGCGC CCTTCAGCCC TTACGACCAG CAGGACTTTC TCGTTACTGC CTATAAACCG CCATTTACGC GCTTGCAGGC ACTGGAACTC AAACAGCCGA AAATCCAGAG ACTGCCGGTA CAGACTGCAA ACAACACTGC CGAAAAGCTC TCGAACTCCC TGATAAATGA TCTGCGAACA TTGAAAACCC GTAACGAACC CCACGCACTG AAGTTCATCG ACGAATACCG CATCGAAAAC GGGACGGTCT ATTATCGTCA GGGAATGCGT GCAAGAACCA TGTCGGTCAC AGAACTTGCT GACAGGAAAG GCAAAGATCC GCTCATAACA AGAACATTTG CGCTTGGAAC CGACCAGTAT GGACGCGATA TACTCAGCAG GGTAATCTAC GGCTCGCGAA TATCGCTCTC CATCGGCTTT CTTGTCGTTA TGATCTCTGT AACCCTCGGC ACCGTTATAG GAATCTCATC CGGTTATTTC GGCGGCTGGA TAGATGCTTT CCTCATGAGA ATTGTCGATG TGCTGATCGC TTTTCCTGCA CTCTTCCTCA TTCTCATTAT CATCGCGACA TTCGGCAATT CCATTTACCT CATCGTCATT ACGCTCTCGT TTACCGGCTG GATGGGGGTT GCACGCATCG TGAGAAGCCA GGTGCTCTCG CTCAAGGAAC AGGAGTTTAT TCTGGCAGCA AAAGCTCTGG GCCTGTCGAG CATGAGAATC ATCTTCCGCC ATCTCGCTCC GAACACCCTC ACACCCGTCA TCATTGCCGC AACACTCAGG ATCGGCAGCA TCATTCTTAC AGAAGCCGGC CTCTCCTTCC TCGGTCTCGG TGTTCAGGCG CCAACCCCGA GCTGGGGCAA CATCATCAAC GAAGGACGCG ACAGCCTTCT GAACCACTGG TGGATCTCGA CGTTTCCCGG TATCGCCATT CTCACCACCG TTGTCTGTTT CAACCTCATC GGAGATGGCG TCAGGGACGC CCTCGATCCC AGAATGCGAG GACATTCATG A
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Protein sequence | MLNRNTTNTT RKQRTLPIYH LIPGIGLISR KKRGLGFFLF FSFMIYLFIL MLQGDLVVIS FRSLVSATSL ILLSPEKLRE VFSIEIIEFW IASIAVIAVP IALFMVSKKT VAEESQQKEG ENRHASSLGR ISLQAFMHNT IAQSAAVVIF VLYSVAFLAP FLAPFSPYDQ QDFLVTAYKP PFTRLQALEL KQPKIQRLPV QTANNTAEKL SNSLINDLRT LKTRNEPHAL KFIDEYRIEN GTVYYRQGMR ARTMSVTELA DRKGKDPLIT RTFALGTDQY GRDILSRVIY GSRISLSIGF LVVMISVTLG TVIGISSGYF GGWIDAFLMR IVDVLIAFPA LFLILIIIAT FGNSIYLIVI TLSFTGWMGV ARIVRSQVLS LKEQEFILAA KALGLSSMRI IFRHLAPNTL TPVIIAATLR IGSIILTEAG LSFLGLGVQA PTPSWGNIIN EGRDSLLNHW WISTFPGIAI LTTVVCFNLI GDGVRDALDP RMRGHS
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