Gene VEA_001972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001972 
Symbol 
ID8555601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp370120 
End bp371076 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content48% 
IMG OID646404965 
Productpeptide ABC transporter permease component 
Protein accessionYP_003284600 
Protein GI262392746 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAT CAAATGTAAC ACCAGCTCCT GAAGCCGCTC CATCTGCATG GCAGCGTTTT 
AAAGAGTCGG ACTTCTTGTA TTACTTCAAG CGCGACAAAG TGGCGATGGC AAGTTTTACG
GTCTTTATGA TGTTCTTAGT GTTGGCATTA GCTGCGCCAA TTCTAGCTCC GACTGACCCG
TATGATCTGA CGTCTATCGA CATCATGGAT TCAGAGCTAC CACCGTCTTG GATGGAAGAG
GGCGATGAGC GTTTTGTTCT TGGTACTGAT GAGCAAGGCC GTGATATTTT ATCGACCATT
CTTTACGGTT CTCGTTTGTC TTTGACGATC GGCTTTTTAG CCGTCGGTCT TCAGTTGATT
TTGGGTATCA TCATTGGTTT GTCGGCGGGT TACTTCGGTG GTCGTATCGA TAGCTTCTTG
ATGCGCTTTG CGGATGTTCA ACTATCGTTC TCAACCATGA TGGTGGCGAT CATCGTATCG
GCCATTTTCA AAGCCAGCTT TGGCAGCGAT TTTTACAGCC AATATGCGGT GGTCATGCTG
GTGGTGATCA TCGGTGTGGC TGAATGGCCG CAATACGCAC GTACCATTCG TGCTTCAGTA
CTGGCTGAGA AGAAGAAAGA ATACGTAGAA GCGGCACGCG TGATGGGCTT TAAAGCGCCA
CGCATCATGT TCCGTCACAT CCTGCCGAAC TGTTTATCAC CAATCTTGGT TATCTCGACG
GTACAGGTAG CGAATGCGAT CATGTCGGAA GCGGCACTGT CATTCCTAGG TTTGGGTCTT
CCTGTTGATC AGCCGTCACT AGGTGCGCTG ATCAGCATCG GCTTTAACTA CATCTTCTCA
GGTGCGTGGT GGATTACTGC CTTCCCAGGC ATCGTGTTGG TTACACTGGT TCTGGTTATC
AACTTATTGG GTGACTGGTT ACGAGATGTA TTCAACCCGA AACTGTACAA AGGTTAA
 
Protein sequence
MSQSNVTPAP EAAPSAWQRF KESDFLYYFK RDKVAMASFT VFMMFLVLAL AAPILAPTDP 
YDLTSIDIMD SELPPSWMEE GDERFVLGTD EQGRDILSTI LYGSRLSLTI GFLAVGLQLI
LGIIIGLSAG YFGGRIDSFL MRFADVQLSF STMMVAIIVS AIFKASFGSD FYSQYAVVML
VVIIGVAEWP QYARTIRASV LAEKKKEYVE AARVMGFKAP RIMFRHILPN CLSPILVIST
VQVANAIMSE AALSFLGLGL PVDQPSLGAL ISIGFNYIFS GAWWITAFPG IVLVTLVLVI
NLLGDWLRDV FNPKLYKG