Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001972 |
Symbol | |
ID | 8555601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 370120 |
End bp | 371076 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646404965 |
Product | peptide ABC transporter permease component |
Protein accession | YP_003284600 |
Protein GI | 262392746 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAT CAAATGTAAC ACCAGCTCCT GAAGCCGCTC CATCTGCATG GCAGCGTTTT AAAGAGTCGG ACTTCTTGTA TTACTTCAAG CGCGACAAAG TGGCGATGGC AAGTTTTACG GTCTTTATGA TGTTCTTAGT GTTGGCATTA GCTGCGCCAA TTCTAGCTCC GACTGACCCG TATGATCTGA CGTCTATCGA CATCATGGAT TCAGAGCTAC CACCGTCTTG GATGGAAGAG GGCGATGAGC GTTTTGTTCT TGGTACTGAT GAGCAAGGCC GTGATATTTT ATCGACCATT CTTTACGGTT CTCGTTTGTC TTTGACGATC GGCTTTTTAG CCGTCGGTCT TCAGTTGATT TTGGGTATCA TCATTGGTTT GTCGGCGGGT TACTTCGGTG GTCGTATCGA TAGCTTCTTG ATGCGCTTTG CGGATGTTCA ACTATCGTTC TCAACCATGA TGGTGGCGAT CATCGTATCG GCCATTTTCA AAGCCAGCTT TGGCAGCGAT TTTTACAGCC AATATGCGGT GGTCATGCTG GTGGTGATCA TCGGTGTGGC TGAATGGCCG CAATACGCAC GTACCATTCG TGCTTCAGTA CTGGCTGAGA AGAAGAAAGA ATACGTAGAA GCGGCACGCG TGATGGGCTT TAAAGCGCCA CGCATCATGT TCCGTCACAT CCTGCCGAAC TGTTTATCAC CAATCTTGGT TATCTCGACG GTACAGGTAG CGAATGCGAT CATGTCGGAA GCGGCACTGT CATTCCTAGG TTTGGGTCTT CCTGTTGATC AGCCGTCACT AGGTGCGCTG ATCAGCATCG GCTTTAACTA CATCTTCTCA GGTGCGTGGT GGATTACTGC CTTCCCAGGC ATCGTGTTGG TTACACTGGT TCTGGTTATC AACTTATTGG GTGACTGGTT ACGAGATGTA TTCAACCCGA AACTGTACAA AGGTTAA
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Protein sequence | MSQSNVTPAP EAAPSAWQRF KESDFLYYFK RDKVAMASFT VFMMFLVLAL AAPILAPTDP YDLTSIDIMD SELPPSWMEE GDERFVLGTD EQGRDILSTI LYGSRLSLTI GFLAVGLQLI LGIIIGLSAG YFGGRIDSFL MRFADVQLSF STMMVAIIVS AIFKASFGSD FYSQYAVVML VVIIGVAEWP QYARTIRASV LAEKKKEYVE AARVMGFKAP RIMFRHILPN CLSPILVIST VQVANAIMSE AALSFLGLGL PVDQPSLGAL ISIGFNYIFS GAWWITAFPG IVLVTLVLVI NLLGDWLRDV FNPKLYKG
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