Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_4111 |
Symbol | |
ID | 8135109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 4645583 |
End bp | 4646482 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644867429 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003019662 |
Protein GI | 253690472 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.553979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGC CTTCCGAACC CGTCGTGGCC GCAGCCACGC TTGATGAAGA GACGATACGT TCGCCGTGGC GCGATTTCGT TCAGGTCTTT ATCCGTAACC CGATGGCGCT GGTGTCCAGC GGCTTTGTCC TGCTGCTGGT ACTGGTTGCG ATTTTCGCGC CCTGGCTGGC ACCGTGGAAC CCGATGGAGC CTGACTGGAC GGCGCTGGCT TCACCGCCTT CAGCAGCGCA CTGGATGGGC ACCGACGATC TCGGACGCGA TGTGATGAGC CGCATCATCT ACGGCGCACG CATCTCGTTA TACATCGGTA TCTTTTCCGT CACGCTCGGC ATGCTGGTCG GCATCGTACT CGGCCTGCTG GCAGGCTATT ACGGCCGCTG GGTGGATACG CTGATCATGC GCGGTTCCGA CGTGCTGTTC GCCTTCCCCG GCATGCTGCT GGCGATTGCG GTCGTCGCCA TCCTCGGCCC CGGCCTGAAT AACGTCATTA TCGCTGTCGC CGTCTTCAGC GTACCGGTCT TCGCGCGAAT CGTGCGAGCC TCTACGCTGT CGCTGAAACA GGCAGCCTAT GTAGAAGCAG TACGCTGCGC TGGTGCACCG GATCGCATCA TACTGATGCG CCACATCCTG CCCGGCACGC TGCCTAACGT GATCGTCTAT TTCACCATGC GTATCGGCAC CAGCATCCTG ACGGCGGCAG GGCTGAGCTT CATCGGCCTT GGCCCAGAAC CGGACGTACC GGAATGGGGC AATATTCTGG CGATGAGCCG CAGCCTGATG ATGGCTGGTG CCTGGCACGT CAGCGTGTTC CCCGGTCTGG CGATTTTCTT TACCGTGCTG GCGTTTAACC TGCTCGGGGA TGCGCTGCGT GATACGCTCG ATCCCAAACT GAAAAGCTGA
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Protein sequence | MNLPSEPVVA AATLDEETIR SPWRDFVQVF IRNPMALVSS GFVLLLVLVA IFAPWLAPWN PMEPDWTALA SPPSAAHWMG TDDLGRDVMS RIIYGARISL YIGIFSVTLG MLVGIVLGLL AGYYGRWVDT LIMRGSDVLF AFPGMLLAIA VVAILGPGLN NVIIAVAVFS VPVFARIVRA STLSLKQAAY VEAVRCAGAP DRIILMRHIL PGTLPNVIVY FTMRIGTSIL TAAGLSFIGL GPEPDVPEWG NILAMSRSLM MAGAWHVSVF PGLAIFFTVL AFNLLGDALR DTLDPKLKS
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