| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3119 |
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| Symbol | nikC |
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| ID | 4786632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3320176 |
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| End bp | 3321114 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640091690 |
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| Product | IM pore protein |
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| Protein accession | YP_001022307 |
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| Protein GI | 124268303 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.141306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0623657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACG CAGACGATCG TGAGATGAAC GCAGACGCCC GTCATCGGTT CGTGGACAGC
GAGATCTGGC ATAGCTTTCG CGCCTCGCCA GTGGCCATGC TGGCGGCGGC CATCGCCGCG
GCCTGTCTGC TCAGCGCGTT GCTGGCGCCG CTCGTGGCGC CGCACGATCC CTTCGATCTC
GCGACGCTCG ACCTCGGCGA CTCGCGCCTG CCGCCCGCCT GGATGGCCGA GGGCAAAAGC
GCCTACCTGC TGGGTACCGA CGACCAGGGC CGAGACATCC TTTCGGCCGT GATGTACGGC
GCACGCATAT CGCTGGCCGT GGGCATTGCC TCGGTGCTGC TGTCGATGCT GGTCGGCGTG
ACGCTGGGTC TGGTGTCGGG CTTCGCCGGC GGTCGCGTCG ATGCTCTCAT CATGCGCGTG
TGTGATGTGA TGCTGTCCTT TCCTGCCATC CTGGTGGCCT TGATGATCGA CGGCGTGGGT
CGCGCGGTCT TCCCCGCGGC CCACGAGGCG CTGGCCTTCG GTGTGCTGAT CCTCGCCATC
TCGTTGACCG GCTGGGTGCC TTACGCGCGC ACAGTACGCG GGTCGACCCT GGTCGAGCGA
CAGAAGGAGT ACGTGCAGGC GGCACGCGTG ATCGGCGTGT CGCCGGTGCG CATCATGCGT
CGCCACGTGC TGCCGAACGT GCTCGGGCCG GTGTTCGTCC TGGCGACGAT CCAGGTCGCC
ACGGCCATCA TCACCGAGGC GACGCTGAGC TTCCTCGGCG TCGGCGTGCC GCCGACCTCG
CCCTCGCTGG GCACCCTGAT CCGCATCGGC AACGATTTTC TGTTCAGCGG CGAGTGGTGG
ATCGCGCTCT TTCCCGGCGC GATGCTGGTG CTGATCGCGC TGAGCGTGAA CCTGCTCGGC
GACTGGCTGC GCGACGCGCT GAATCCGAGG CTGAGATGA
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| Protein sequence | MGDADDREMN ADARHRFVDS EIWHSFRASP VAMLAAAIAA ACLLSALLAP LVAPHDPFDL
ATLDLGDSRL PPAWMAEGKS AYLLGTDDQG RDILSAVMYG ARISLAVGIA SVLLSMLVGV
TLGLVSGFAG GRVDALIMRV CDVMLSFPAI LVALMIDGVG RAVFPAAHEA LAFGVLILAI
SLTGWVPYAR TVRGSTLVER QKEYVQAARV IGVSPVRIMR RHVLPNVLGP VFVLATIQVA
TAIITEATLS FLGVGVPPTS PSLGTLIRIG NDFLFSGEWW IALFPGAMLV LIALSVNLLG
DWLRDALNPR LR
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