| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7028 |
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| Symbol | |
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| ID | 7380225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 26664 |
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| End bp | 27590 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643641173 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002539470 |
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| Protein GI | 222102431 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTTG ATAGAGCGCA GATGGAAAAG CTTGCGACAC GAATGAGAGA CGAGACCGTC
AGAGGCCGCT CCCCATGGGC CGATGCAAGA CGGCGCTTCA TGCGCAACAA GGCCGCGATT
GCGGGCCTGA TTGGTCTCTG TCTTGTCGCC GTTTTTGCCC TTTTGGGCTC TTATCTCGCC
CATTGGTCGA ATGATGAGCT GGATTTTTCG GTGATGGGGC AGGTGGTTGA TCTTGGCCGT
CCATCATTTG AAAATGGTCA CTATTTTGGC ACCGACGATC TGGGCCGCGA TCTGTTTGCC
CGCACCGTAC AGGCAACTCA AGTGTCCATG TCGGTGGCGC TGATTGGCAG CCTGATTGCC
GTGGTGGTTG GCACATTGTA TGGTGCGATC TCCGGCTACG CGGGCGGTAT TGTCGATAGC
ATCATGATGC GCACCGTCGA TATTTTGATG GCCATTCCCT ACATGTTTGT GCTGATTCTG
CTGCTGGTGA TGTTTGGCCG TTCCACCACC ATTTTGTTCG TGGGCATTGG CTTGATGTCG
TGGCTGGATA TGAGCCGCAT TGTGCGCGGT CAAACCCTGA GCATCAAATC CAAGGAATAT
ATCGAGGCAG CACAGGCCAC GGGCGTGTCA TCCATCAAGA TCATCTTGCG GCATGTCCTG
CCCAACCTGA TGGGCGTGGT CACGGTCTAT GCCACCTTGC TGGTGCCGAT CATGATCATG
ACAGAGAGCT TTATCAGCTT CCTTGGCCTT GGCATTCAAG AGCCGTTGAC CAGTTGGGGG
GCGATGATTT CTGAAGGGGC TGGCAGCATG ACCCATGGCA CCTTGTGGCA ACTGGCGGCA
CCGCTGTTTT TCTTCATTAT CACGCTGTTT TCCTTCTATT TCGTTGGAGA CGGTTTGCGC
GACGCGCTGG ACCCGAAGGA TCGCTGA
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| Protein sequence | MMVDRAQMEK LATRMRDETV RGRSPWADAR RRFMRNKAAI AGLIGLCLVA VFALLGSYLA
HWSNDELDFS VMGQVVDLGR PSFENGHYFG TDDLGRDLFA RTVQATQVSM SVALIGSLIA
VVVGTLYGAI SGYAGGIVDS IMMRTVDILM AIPYMFVLIL LLVMFGRSTT ILFVGIGLMS
WLDMSRIVRG QTLSIKSKEY IEAAQATGVS SIKIILRHVL PNLMGVVTVY ATLLVPIMIM
TESFISFLGL GIQEPLTSWG AMISEGAGSM THGTLWQLAA PLFFFIITLF SFYFVGDGLR
DALDPKDR
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