Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002961 |
Symbol | |
ID | 8556691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1501518 |
End bp | 1502420 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646406054 |
Product | oligopeptide transport system permease protein OppC |
Protein accession | YP_003285588 |
Protein GI | 262393734 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAACGA AAAAAGAAAA CCTAGAAGCG ATTGAGAAGT TCTCCGAAAA CTTGGAGATT GAAGGTCGCA GTCTTTGGCA AGATGCTCGT ATCCGTTTTA TGCGCAACAA AGCGGCAATG GTGAGCTTAT TCCTTCTTGT TCTAATGACG TTGGCGGTGA TTATTCTGCC AATGATCGCA CCGCACACCT TTGATGATAC TGACTGGTAC GCAATGCACG TTGCACCGAA TGCTGACCAT TGGTTTGGTA CCGACAGCTT AGGTCGTGAC TTATACGTAC GCACGCTAAT CGGCGGTCGT ATTTCGTTGA TGGTGGGGGT CATGGGTGCA TTTGTAGCTG TACTGATTGG TACGCTCTAT GGCGCAGCAT CTGGTTTTAT CGGCGGTAAA GTTGACCGTG TGATGATGCG TATTCTAGAG ATTTTGTACG CGGTACCGTT TATGTTCCTG GTAATCGTAC TTGTGACATT CTTCGGTCGT AACATCATGC TGATCTTTGT CGCGATTGGT GCTATCGCAT GGCTAGATAT GGCGCGTATT GTACGTGGTC AGACACTCAG CTTACGTAGC AAGGAGTTCA TCGAAGCTGC ACACGTGTGT GGTGTTAGCA ACTGGAAAAT TATCACTCGT CATATCGTGC CGAACGTACT GGGTATTGTA GCGGTATACT CCACGCTACT TATCCCGAGC ATGATCCTGA CGGAGTCATT CCTATCATTC CTTGGTCTTG GTGTTCAGGA ACCGATGACA AGTTGGGGCG CGCTTCTACA AGAAGGTGCA CAGACAATGG AAGTGGCAAT CTGGCAGCTG GCATTCCCAG CCGTGTTCAT GGTTGTGACG CTATTCTGCT TCAACTACGT TGGTGACGGC CTGCGCGATG CGCTGGATCC AAAAGACAGA TAA
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Protein sequence | MLTKKENLEA IEKFSENLEI EGRSLWQDAR IRFMRNKAAM VSLFLLVLMT LAVIILPMIA PHTFDDTDWY AMHVAPNADH WFGTDSLGRD LYVRTLIGGR ISLMVGVMGA FVAVLIGTLY GAASGFIGGK VDRVMMRILE ILYAVPFMFL VIVLVTFFGR NIMLIFVAIG AIAWLDMARI VRGQTLSLRS KEFIEAAHVC GVSNWKIITR HIVPNVLGIV AVYSTLLIPS MILTESFLSF LGLGVQEPMT SWGALLQEGA QTMEVAIWQL AFPAVFMVVT LFCFNYVGDG LRDALDPKDR
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