Gene Ping_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0564 
Symbol 
ID4623941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp731992 
End bp732936 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content42% 
IMG OID639795760 
Productpeptide ABC transporter, protein inner membrane binding component 
Protein accessionYP_942017 
Protein GI119944337 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTA TTACTTCTTC TCATGTCCCG ACCCGTTGGG AACGTTTGAA AAACTCAGAT 
CTGATTTATT ATTTTCTGAA AGACAAAGTC GCAATGTTCA GTTTTGCCAT CTTTCTGACT
TGTTTGCTGA TGTCTTTATT TGCGCCACTT ATTGCACCGA CTGATCCCTA TGATCTTACC
AGCATTAGTC TGATGGATTC GGAACTTCCC CCTGCTTGGA TGGCAGAGGG AGATGAGAAT
TTTTTACTGG GAACTGACGA TCAAGGGCGC GATATATTCT CAACCATACT TTATGGCTCT
CGTTTATCCT TAACCATTGG CTTTTTAGCC GTCGGCTTGC AGCTTATATT AGGTATAGTC
ATTGGTCTTT CTTCTGGTTA TTTTGGCGGA CGTATTGACA GTTTTCTGAT GCGTTTTGCC
GATGTACAGT TGTCCTTCTC AACCCTGATG GTGGCTATTA TTGTCTCGGC TATTTTTAAA
GCGAGTTTTG GTAATGAATT CTACAGTGAA TATGCGGTGA TCATGCTGGT TGTGATCATC
GGTATTGCCG AATGGCCGCA ATATGCGCGC ACCATTCGTG CTTCGGTACT GGCGGAAAAG
GAAAAAGAAT ACGTAGAAGC TGCGCAGGTG ATGGGATTTA AAGCCGGTCG AATAATGTTC
AGACATATTT TACCAAATTG TCTATCACCG ATTCTGGTTA TTTCTACGGT ACAAGTTGCT
AATGCAATCA TGTCTGAAGC TGCATTATCA TTTTTGGGCT TAGGTTTACC CGTTGACCAG
CCTTCATTAG GTGCGCTGAT TAGTATAGGT TTTAAATATA TTTTCTCGGG TGCCTGGTGG
ATAACACTCT TCCCTGGGAT TGTGCTGGTA ACTCTGGTAC TGGTTATTAA CCTGCTGGGT
GACTGGTTAA GAGATGCCTT TAACCCGAAA ATCTACAAAG GTTAA
 
Protein sequence
MNTITSSHVP TRWERLKNSD LIYYFLKDKV AMFSFAIFLT CLLMSLFAPL IAPTDPYDLT 
SISLMDSELP PAWMAEGDEN FLLGTDDQGR DIFSTILYGS RLSLTIGFLA VGLQLILGIV
IGLSSGYFGG RIDSFLMRFA DVQLSFSTLM VAIIVSAIFK ASFGNEFYSE YAVIMLVVII
GIAEWPQYAR TIRASVLAEK EKEYVEAAQV MGFKAGRIMF RHILPNCLSP ILVISTVQVA
NAIMSEAALS FLGLGLPVDQ PSLGALISIG FKYIFSGAWW ITLFPGIVLV TLVLVINLLG
DWLRDAFNPK IYKG