| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4252 |
|---|
| Symbol | |
|---|
| ID | 4695180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4690576 |
|---|
| End bp | 4691406 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639851999 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_998975 |
|---|
| Protein GI | 121611168 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.176316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.343929 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCT ATGCGCGCAA CAAAGGTGCC GTGGCCGGTC TGGCCATCGT GGGCCTGGTC
ATCCTGGTGG CACTGCTGGC GGGGTTCGCC TTTCCGCAAA GCCCCTGGAA TTCCGTGGCC
GAGCCGCTGC TCGACCCGTT GTCCGACATG GCGCATCTGC TGGGCACCGA CATGCTGGGG
CGCGACATTG CTGCGGGGCT GGCGCATGGG GCGCGCGTTT CGCTATTGGT GGGAGTGGTG
AGCACCGCAG TGGCCACGCT CATCGGCATC ACCATTGGCG CGCTGGCCGG CTACCACGGC
GGGCGGCTGG ACGATGTGCT GATGCGCCTG ACCGAGTTCT TCCAGACCAT CCCGACGCTG
GCGATGGCGG TGGTGCTGGT GGCGATCTTC CAGCCGACCA TCACGTCCAT CATCACGGCC
ATCGCCGTGG TTTCCTGGCC GCCGGTGGCG CGCCTGGTGC GCGGCGAGTT CCTGTCGCTG
CGCTCGCGCG AGTTCGTGCA GGCGGCCGAG GTCATCGGCC AGAGCGCGTC GCGCATCATC
TTCACGCAGA TACTGCCGAA CACGATGTCG CCCATCATCG TGACGGCTTC GCTGATGATT
GCCACCGCCA TCCTGACCGA GTCCGCGCTG TCGTTCCTGG GCCTGGGGGA TCGCAACCTC
ATGAGCTGGG GGTTCATGAT CGGTGCGGCG CGCACCATGG TGCGCGAAGC CTGGTGGATG
AGCTTCCTGC CGGGGGTGGC GATCCTGCTG ACGGTATTGG CCGTCAATCT GATCGGCGAA
GGCCTCAACG ATGCGTTGAA CCCGCATCTG CGCGACCGGG GTGCGGCATG A
|
|---|
| Protein sequence | MKRYARNKGA VAGLAIVGLV ILVALLAGFA FPQSPWNSVA EPLLDPLSDM AHLLGTDMLG
RDIAAGLAHG ARVSLLVGVV STAVATLIGI TIGALAGYHG GRLDDVLMRL TEFFQTIPTL
AMAVVLVAIF QPTITSIITA IAVVSWPPVA RLVRGEFLSL RSREFVQAAE VIGQSASRII
FTQILPNTMS PIIVTASLMI ATAILTESAL SFLGLGDRNL MSWGFMIGAA RTMVREAWWM
SFLPGVAILL TVLAVNLIGE GLNDALNPHL RDRGAA
|
|---|
| |