| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1948 |
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| Symbol | oppC |
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| ID | 6988934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2085095 |
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| End bp | 2085997 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380243 |
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| Product | oligopeptide transport system permease protein C |
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| Protein accession | YP_002263337 |
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| Protein GI | 209695408 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAACGA AAAAAGCAAA TTTAGAAGCG ATCGAGAGTT TCTCTGAAAA TCTAGAAATA
GAAGGTCGTA GTTTATGGCA GGATGCCCGT TTACGCTTTA TGAGAAATAA AGCCGCGATG
ATCAGCTTAT GTGTATTAAC TATAATGACA CTTGCTGTTG TCTTTTTACC GATGTTTAGT
CAATACGCTT ATGATGATAC GGATTGGTAT GCATTGCACG AAGCACCAAG CCTTACGCAT
CTTTTTGGCA CCGATAGTTT AGGGCGTGAC CTTTTTGTAC GTACCTTGGT TGGTGGTCGA
ATCTCCTTGA TGGTGGGTAT TTTAGGAGCA CTGGTAGCGG TAGTTATCGG TACGCTTTAT
GGCGCAACTT CTGGTTTTGT CGGTGGTAAA ATCGACCGAG TTATGATGCG TTTTATTGAG
ATCCTATACG CGGTTCCATT CATGTTCTTA GTTATTGTAC TAGTGACGTT TTTTGGTCGA
AATATTATCC TGATCTTTGT TGCGATCGGT GCCATTGCTT GGCTTGATAT GGCACGTATA
GTTCGTGGAC AAACATTGAG TTTACGAAGT AAAGAGTTCA TTGAAGCGGC ACACGTTTGT
GGTGTGAGTA AGTGGGGAAT TATTACTCGT CATATCGTGC CTAATGTACT GGGTATTGTT
GCGGTATATT CAACGTTACT TATCCCAAGC ATGATCTTAA CTGAATCATT CCTATCTTTC
CTTGGCTTAG GGGTGCAAGA GCCAATGACG AGTTGGGGGG CTTTACTCCA AGAAGGCTCT
CAAACCATGG AAGTGGCTAT TTGGCAGCTC ATTTTCCCTG CGTTATTTAT GGTTGTTACC
TTGTTCTGTT TTAACTATGT AGGTGATGGT TTACGTGATG CGCTGGATCC AAAAGACAGA
TAA
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| Protein sequence | MLTKKANLEA IESFSENLEI EGRSLWQDAR LRFMRNKAAM ISLCVLTIMT LAVVFLPMFS
QYAYDDTDWY ALHEAPSLTH LFGTDSLGRD LFVRTLVGGR ISLMVGILGA LVAVVIGTLY
GATSGFVGGK IDRVMMRFIE ILYAVPFMFL VIVLVTFFGR NIILIFVAIG AIAWLDMARI
VRGQTLSLRS KEFIEAAHVC GVSKWGIITR HIVPNVLGIV AVYSTLLIPS MILTESFLSF
LGLGVQEPMT SWGALLQEGS QTMEVAIWQL IFPALFMVVT LFCFNYVGDG LRDALDPKDR
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