Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0590 |
Symbol | |
ID | 3834480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 700650 |
End bp | 701558 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637824674 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_425681 |
Protein GI | 83591929 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.305304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGGGT TCCGCGCCCG GGCGGCCAAC GCCCTTCTGC CCGCCGATCC CAGCCTGCCG CCGCCGCGTA GCCTGTGGAA GAACGCCCGC CGGCGCTTCT ATGGCAATCG GGCGGCGATG ACCTCGCTGG TCATCCTGAT CGCCATCCTC GCCCTAGCGG TGGTCGGCCC GTTGCTGTCG CCCCATCCCT ATGACGAGAT CTATTGGGAG GCCATCCAGA TGCCGCCCGA TTTCGCCAAT GGCTTCTGGT TCGGCACCGA TGGCAACGGC CGCGACCTGT TCGTGCGCAC GCTTTACGGC GCCCGGGTCT CGCTGGCCGT CGGCGTGATC GCCACCACGG TCAGTCTGGT CATCGGCGTC GTCTATGGCG CTATCGCCGG CTATTTCGGC GGGCGCGTCG ACATGCTGAT GATGCGCTTC GTCGATGTGC TGTATTCCCT GCCCTTCATG TTCTTCGTCA TCATGTTGAT GGTGGTTTTC GGCCGCAACA TCTTCCTGAT CTTCGTCGCC CTGGGCGCGG TGGAATGGCT GACCATGGCC CGCATCGTCC GCGGTCAGAC CATGGCGGTC ACCCGCAAGG AATTCATCGA GGCCGCCCAC GCCATCGGCG TCTCCGACGC CACGATCATC CGCCGCCACG TCATTCCCAA CATCCTGGGG CCGGTGATCG TCTATGCCAC CCTGACCATT CCCCAGGTGG TGCTGACCGA AAGCTTCCTG TCGTTCCTTG GCCTTGGCGT GCAAGAGCCG CTGACCAGCT GGGGCGTGCT GATTTCGGAA GGGGCGAGGG TTCTGGAGGT CTCGCCGTGG ATGCTGCTGT TCCCGGCCTT TTTCCTGGCG CTCACCTTGT TGTGCTTCAA TTTCATTGGC GACGGCTTGC GCGACGCTCT CGATCCGAAG GATCGGTAA
|
Protein sequence | MIGFRARAAN ALLPADPSLP PPRSLWKNAR RRFYGNRAAM TSLVILIAIL ALAVVGPLLS PHPYDEIYWE AIQMPPDFAN GFWFGTDGNG RDLFVRTLYG ARVSLAVGVI ATTVSLVIGV VYGAIAGYFG GRVDMLMMRF VDVLYSLPFM FFVIMLMVVF GRNIFLIFVA LGAVEWLTMA RIVRGQTMAV TRKEFIEAAH AIGVSDATII RRHVIPNILG PVIVYATLTI PQVVLTESFL SFLGLGVQEP LTSWGVLISE GARVLEVSPW MLLFPAFFLA LTLLCFNFIG DGLRDALDPK DR
|
| |