| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2716 |
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| Symbol | |
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| ID | 4077023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2861130 |
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| End bp | 2862035 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008041 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_614710 |
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| Protein GI | 99082556 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGA TGACAAACTG GCTGCTCGAC GACTCCCCCA GCTCCCGCCT GCAGGCCTCC
TTGGGTCACA GCTACCGTGT GACACGGATG CTGATGCGCA ATCCTCTTGC CGTGGTGGGC
GCCGTGATTC TGCTGGTGCT GATCCTGGCG GCCATCTTTG CGCCGTGGAT CGCACCGCAT
AGTCCGCTGG GCCAAAACCT CGGTCAGCGC CTGCTGCCGC CTTCGGCAGA GCATTGGATG
GGCACCGATG AGCTGGGCCG CGACATTTTT AGCCGCGTCA TCTATGGCGC ACGCATCACC
TTGCTGATCG TGGCACTGGT GGCAGTAATC TCGGCCCCGC TTGGGCTGCT CATCGGAGCG
GTGTCCGGCT ATTTCGGCGG CTGGACGGAC AAGATCATCA TGGGCGTGAC GGATGTGTTC
CTGTCGATGC CCAAGCTGAT CCTCGCGCTT GCCTTTGTCG CAGCACTCGG GCCGGGGATT
GAGAACGCGA TTATCGCCAT CGCCATCACA TCCTGGCCCG CCTATGCCCG GATCGCGCGC
GCCGAGACAC TGACCTTCCG CAACTCGGAA TTCATCTCGG CCATGCGTTT GCTGGGGGCG
TCGCACACGC GGATCATCAC ACGCCATGTG CTGCCGCTGT GTACCTCGTC GATGATCGTG
CGGGTGACGC TGGATATGGC GGGGATCATC CTGACCGCAG CCGGTTTGGG CTTTCTGGGG
CTTGGCGCAC AGCCGCCGCT GCCCGAATGG GGTGCGATGA TCTCGCGCGG TCGGGCCTTT
ATCCTCGATC AGTGGTGGGT CGCCACCATG CCCGGCTTTG CCATCATCAT CGTCTCGCTC
GGTTTCTGTT TCCTCGGTGA CGGCCTGCGC GATGTGCTGG ACCCCAAACA GGGAGGCAAA
TCATGA
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| Protein sequence | MTTMTNWLLD DSPSSRLQAS LGHSYRVTRM LMRNPLAVVG AVILLVLILA AIFAPWIAPH
SPLGQNLGQR LLPPSAEHWM GTDELGRDIF SRVIYGARIT LLIVALVAVI SAPLGLLIGA
VSGYFGGWTD KIIMGVTDVF LSMPKLILAL AFVAALGPGI ENAIIAIAIT SWPAYARIAR
AETLTFRNSE FISAMRLLGA SHTRIITRHV LPLCTSSMIV RVTLDMAGII LTAAGLGFLG
LGAQPPLPEW GAMISRGRAF ILDQWWVATM PGFAIIIVSL GFCFLGDGLR DVLDPKQGGK
S
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