Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4338 |
Symbol | |
ID | 5060823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4915025 |
End bp | 4915927 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640476600 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001161144 |
Protein GI | 145596847 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.244803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.769148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC TGTCCGAAGC GGTCGGCCCG GCTGAGCCAA ACGACGCGCC ACCGCGCGGT CTGTGGCGGC AGGGGCTGAC CGTCTTCTGC GAGAACCGGC TTGCCCTGGT GGGACTGGGC CTGTTCGTCC TGCTGGCCGG GGTCTGTTTC CTCGGACCGC TGGTCTACCA CACCGACCAG GTGCACACGG ACCTCACCGC CGTGCACCTG GCCCCGGGAG AGCAGGGACA TCCGCTCGGC ACCGACGGGG TCGGCTACGA CCAGTTGGGG CGGCTGATGC TCGGCGGCCA GACCTCCATC ATCGTCGGAC TGGCCGCCGG GGTGCTCGCC ACCATCGTTG GCACGCTGCT GGGTGCCATC GCCGGCTTCT TCGGCGGCTG GGTGGACGCC GCGGTGATGC GCGTGGTCGA CGCGATGATG TCGATCCCCT CGTTGTTCCT GTTCATGCTG CTCGCCGCCA TCGTCACGCC GAGCGCGCCG ATGCTCATCC TCATCATCGG TGCCTTCGCC TGGCTGGGCC CGGCCCGGCT CGTGCGGGGC GAGGCACTGA CGCTGCGCTC ACGTGAGTAC GTCCAGGCGA TGCGTGGGAT GGGTGGCACG GGTGGCCGTG CGGTCCGCCG ACACATCATC CCCAACGCCA TCGGCACGGT AATCGTCAAC GCCACCTTCC AGGTCGCCGA CGCGATCCTC TACGTCGCCT ACCTGTCCTT CCTTGGCCTC GGCATCCCCC CACCGGCCGC GAACTGGGGT GGCATGCTCT CCGATGGTCT CGCGGACACC TACAGCGGCC ACTGGTGGCT GTTGTACCCG CCCGGGATCG CCATCATCCT CATCGTCCTC GCCTTCAACT TCATCGGTGA CGGACTCAGG GACGCCTTCG AGGTTCGCCT CCGGCGACGC TAG
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Protein sequence | MSTLSEAVGP AEPNDAPPRG LWRQGLTVFC ENRLALVGLG LFVLLAGVCF LGPLVYHTDQ VHTDLTAVHL APGEQGHPLG TDGVGYDQLG RLMLGGQTSI IVGLAAGVLA TIVGTLLGAI AGFFGGWVDA AVMRVVDAMM SIPSLFLFML LAAIVTPSAP MLILIIGAFA WLGPARLVRG EALTLRSREY VQAMRGMGGT GGRAVRRHII PNAIGTVIVN ATFQVADAIL YVAYLSFLGL GIPPPAANWG GMLSDGLADT YSGHWWLLYP PGIAIILIVL AFNFIGDGLR DAFEVRLRRR
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