More than 300 homologs were found in PanDaTox collection
for query gene Dvul_2374 on replicon NC_008751
Organism: Desulfovibrio vulgaris DP4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008751  Dvul_2374  formate dehydrogenase, subunit FdhD  100 
 
 
262 aa  518  1e-146  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1232  formate dehydrogenase accessory protein FdhD, putative  56.03 
 
 
274 aa  274  1.0000000000000001e-72  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0303539 
 
 
-
 
NC_007519  Dde_0707  formate dehydrogenase accessory protein FdhD, putative  54.23 
 
 
239 aa  232  5e-60  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2410  formate dehydrogenase subunit FdhD  40.32 
 
 
240 aa  150  2e-35  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.038103 
 
 
-
 
NC_013595  Sros_1325  formate dehydrogenase  43.08 
 
 
282 aa  96.3  5e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.201918 
 
 
-
 
NC_007498  Pcar_1840  formate dehydrogenase accessory protein  27.17 
 
 
268 aa  92.8  5e-18  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00380429  n/a   
 
 
-
 
NC_008148  Rxyl_0145  formate dehydrogenase family accessory protein FdhD  42.11 
 
 
289 aa  92  9e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0300  formate dehydrogenase family accessory protein FdhD  32.78 
 
 
268 aa  89.4  6e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_003912  CJE1681  formate dehydrogenase accessory protein  28.24 
 
 
260 aa  88.2  1e-16  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1437  formate dehydrogenase family accessory protein FdhD  42.98 
 
 
255 aa  88.2  1e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1500  formate dehydrogenase accessory protein  28.24 
 
 
260 aa  88.2  1e-16  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.919736  n/a   
 
 
-
 
NC_009707  JJD26997_1860  formate dehydrogenase accessory protein  27.24 
 
 
260 aa  88.2  1e-16  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2010  formate dehydrogenase family accessory protein FdhD  32.57 
 
 
248 aa  87  3e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.068526  n/a   
 
 
-
 
NC_007575  Suden_0817  formate dehydrogenase accessory protein  35.56 
 
 
276 aa  86.7  3e-16  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0766349  n/a   
 
 
-
 
NC_012918  GM21_2817  formate dehydrogenase family accessory protein FdhD  41.23 
 
 
255 aa  85.9  6e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2264  formate dehydrogenase family accessory protein FdhD  41.23 
 
 
468 aa  85.5  8e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3478  formate dehydrogenase family accessory protein FdhD  30.51 
 
 
292 aa  85.5  9e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  0.739751  normal  0.474196 
 
 
-
 
NC_008346  Swol_1030  formate dehydrogenase accessory protein  29.2 
 
 
263 aa  85.1  0.000000000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1958  formate dehydrogenase family accessory protein FdhD  41.23 
 
 
468 aa  84.3  0.000000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_003910  CPS_4025  formate dehydrogenase accessory protein FdhD  25.09 
 
 
283 aa  84.3  0.000000000000002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  38.16 
 
 
283 aa  84  0.000000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_013512  Sdel_2060  formate dehydrogenase family accessory protein FdhD  26.84 
 
 
262 aa  84.3  0.000000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.0000863556  n/a   
 
 
-
 
NC_008578  Acel_0667  formate dehydrogenase, subunit FdhD  41.78 
 
 
320 aa  84  0.000000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  0.187577  normal 
 
 
-
 
NC_013510  Tcur_3534  formate dehydrogenase family accessory protein FdhD  44.76 
 
 
284 aa  83.2  0.000000000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0719  formate dehydrogenase family accessory protein FdhD  27.61 
 
 
278 aa  82.4  0.000000000000006  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4473  formate dehydrogenase family accessory protein FdhD  43.81 
 
 
276 aa  82.4  0.000000000000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.979472  n/a   
 
 
-
 
NC_013385  Adeg_0152  formate dehydrogenase subunit FdhD  27.6 
 
 
228 aa  82  0.000000000000009  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00000189398  n/a   
 
 
-
 
NC_013441  Gbro_3682  formate dehydrogenase subunit FdhD  41.32 
 
 
279 aa  82  0.000000000000009  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0211  formate dehydrogenase accessory protein  23.67 
 
 
260 aa  81.3  0.00000000000002  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1923  formate dehydrogenase family accessory protein FdhD  28.06 
 
 
280 aa  80.9  0.00000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3278  formate dehydrogenase accessory protein  22.51 
 
 
265 aa  80.9  0.00000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_1911  formate dehydrogenase family accessory protein FdhD  43.64 
 
 
249 aa  80.9  0.00000000000002  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3595  formate dehydrogenase accessory protein  22.14 
 
 
265 aa  80.1  0.00000000000003  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4114  formate dehydrogenase family accessory protein FdhD  43.81 
 
 
293 aa  80.5  0.00000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2744  formate dehydrogenase family accessory protein FdhD  42.11 
 
 
251 aa  80.5  0.00000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2431  formate dehydrogenase family accessory protein FdhD  37.9 
 
 
297 aa  80.1  0.00000000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3374  formate dehydrogenase family accessory protein FdhD  27.84 
 
 
260 aa  80.5  0.00000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_3585  formate dehydrogenase accessory protein  22.14 
 
 
265 aa  80.1  0.00000000000004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  39.34 
 
 
294 aa  80.1  0.00000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013037  Dfer_2665  formate dehydrogenase family accessory protein FdhD  35.09 
 
 
275 aa  80.1  0.00000000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0829  formate dehydrogenase family accessory protein FdhD  37.59 
 
 
296 aa  79.7  0.00000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.00158751 
 
 
-
 
NC_013173  Dbac_1058  formate dehydrogenase family accessory protein FdhD  30.04 
 
 
264 aa  79.7  0.00000000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_0035  formate dehydrogenase family accessory protein FdhD  39.17 
 
 
238 aa  79.3  0.00000000000005  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007517  Gmet_1062  formate dehydrogenase, subunit FdhD  41.94 
 
 
479 aa  79.3  0.00000000000006  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0656292 
 
 
-
 
NC_005945  BAS3364  formate dehydrogenase accessory protein  22.14 
 
 
265 aa  79  0.00000000000008  Bacillus anthracis str. Sterne  Bacteria  normal  0.144836  n/a   
 
 
-
 
NC_007530  GBAA_3628  formate dehydrogenase accessory protein  22.14 
 
 
265 aa  79  0.00000000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3328  formate dehydrogenase accessory protein  22.14 
 
 
265 aa  78.6  0.00000000000009  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0183588  n/a   
 
 
-
 
NC_011773  BCAH820_3578  formate dehydrogenase accessory protein  22.14 
 
 
265 aa  78.6  0.00000000000009  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008942  Mlab_0990  hypothetical protein  34.46 
 
 
506 aa  78.6  0.00000000000009  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.663742 
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  30.89 
 
 
297 aa  78.6  0.00000000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.224084 
 
 
-
 
NC_007778  RPB_0723  formate dehydrogenase accessory protein  29.21 
 
 
277 aa  78.2  0.0000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0737  formate dehydrogenase family accessory protein FdhD  30.71 
 
 
264 aa  78.2  0.0000000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1157  formate dehydrogenase family accessory protein FdhD  42.31 
 
 
274 aa  78.6  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_2122  formate dehydrogenase family accessory protein FdhD  36.04 
 
 
259 aa  77.8  0.0000000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.545765  normal 
 
 
-
 
NC_009483  Gura_3370  formate dehydrogenase family accessory protein FdhD  41.05 
 
 
487 aa  77.4  0.0000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_06930  formate dehydrogenase family accessory protein FdhD  26.98 
 
 
297 aa  77.8  0.0000000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.215671 
 
 
-
 
NC_011886  Achl_0919  formate dehydrogenase family accessory protein FdhD  37.21 
 
 
292 aa  77.4  0.0000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2076  formate dehydrogenase, subunit FdhD  41.24 
 
 
263 aa  77.4  0.0000000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  9.82479e-16  normal 
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  32.62 
 
 
299 aa  77.4  0.0000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_3657  formate dehydrogenase family accessory protein FdhD  31.85 
 
 
285 aa  77.4  0.0000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.299486 
 
 
-
 
NC_002939  GSU0780  formate dehydrogenase accessory protein FdhD  36.36 
 
 
478 aa  77  0.0000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  0.162723  n/a   
 
 
-
 
NC_013946  Mrub_1914  formate dehydrogenase family accessory protein FdhD  34.46 
 
 
285 aa  77  0.0000000000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.84446  hitchhiker  0.0000450272 
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  33.59 
 
 
299 aa  77  0.0000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_3385  formate dehydrogenase family accessory protein FdhD  27.27 
 
 
483 aa  77  0.0000000000003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3678  formate dehydrogenase accessory protein  22.35 
 
 
265 aa  76.6  0.0000000000004  Bacillus cereus B4264  Bacteria  normal  0.688402  n/a   
 
 
-
 
NC_011146  Gbem_1293  formate dehydrogenase family accessory protein FdhD  29.13 
 
 
255 aa  76.6  0.0000000000004  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000222407  n/a   
 
 
-
 
NC_012918  GM21_2990  formate dehydrogenase family accessory protein FdhD  35.82 
 
 
255 aa  76.3  0.0000000000005  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.68227e-19 
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  26.44 
 
 
263 aa  75.9  0.0000000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009975  MmarC6_1440  formate dehydrogenase family accessory protein FdhD  26.09 
 
 
233 aa  75.9  0.0000000000006  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_008541  Arth_0802  formate dehydrogenase family accessory protein FdhD  40.74 
 
 
309 aa  75.9  0.0000000000006  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0358  formate dehydrogenase family accessory protein FdhD  30.46 
 
 
233 aa  75.9  0.0000000000006  Methanococcus maripaludis C5  Archaea  normal  0.304436  n/a   
 
 
-
 
NC_009635  Maeo_1248  formate dehydrogenase family accessory protein FdhD  29.77 
 
 
249 aa  75.9  0.0000000000007  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009077  Mjls_3577  formate dehydrogenase accessory protein  35.17 
 
 
274 aa  75.5  0.0000000000008  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_3132  formate dehydrogenase family accessory protein FdhD  37.84 
 
 
296 aa  75.5  0.0000000000008  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3572  formate dehydrogenase accessory protein  35.17 
 
 
274 aa  75.5  0.0000000000008  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2742  formate dehydrogenase accessory protein  39.23 
 
 
271 aa  75.5  0.0000000000008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.455642 
 
 
-
 
NC_008705  Mkms_3645  formate dehydrogenase accessory protein  35.17 
 
 
274 aa  75.5  0.0000000000008  Mycobacterium sp. KMS  Bacteria  normal  normal  0.259742 
 
 
-
 
NC_012793  GWCH70_0466  formate dehydrogenase accessory protein  24.14 
 
 
262 aa  75.1  0.000000000001  Geobacillus sp. WCH70  Bacteria  normal  0.276769  n/a   
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  27.42 
 
 
262 aa  75.1  0.000000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_008726  Mvan_4033  formate dehydrogenase accessory protein  36.84 
 
 
287 aa  75.1  0.000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.681532  normal  0.294632 
 
 
-
 
NC_011004  Rpal_0806  formate dehydrogenase accessory protein  27.8 
 
 
276 aa  73.9  0.000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0479  formate dehydrogenase family accessory protein FdhD  33.59 
 
 
233 aa  74.3  0.000000000002  Methanococcus maripaludis C7  Archaea  normal  0.161878  normal 
 
 
-
 
NC_014158  Tpau_2346  formate dehydrogenase family accessory protein FdhD  37.72 
 
 
284 aa  73.9  0.000000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.36394  n/a   
 
 
-
 
NC_007796  Mhun_2204  formate dehydrogenase family accessory protein FdhD  36.45 
 
 
254 aa  74.3  0.000000000002  Methanospirillum hungatei JF-1  Archaea  normal  0.154366  normal  0.450296 
 
 
-
 
NC_011832  Mpal_1216  formate dehydrogenase family accessory protein FdhD  39.53 
 
 
261 aa  73.9  0.000000000002  Methanosphaerula palustris E1-9c  Archaea  normal  0.944709  normal  0.100536 
 
 
-
 
NC_009428  Rsph17025_2852  formate dehydrogenase accessory protein  37.32 
 
 
271 aa  74.7  0.000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.743331  normal  0.675793 
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  40.5 
 
 
278 aa  74.7  0.000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_15020  formate dehydrogenase family accessory protein FdhD  40 
 
 
281 aa  73.9  0.000000000003  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.503102  normal 
 
 
-
 
NC_007493  RSP_1081  formate dehydrogenase accessory protein  37.32 
 
 
271 aa  73.6  0.000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2305  formate dehydrogenase accessory protein  23.9 
 
 
265 aa  73.2  0.000000000004  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1678  formate dehydrogenase family accessory protein FdhD  33.77 
 
 
250 aa  73.6  0.000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.0788652  normal  0.0488768 
 
 
-
 
NC_009485  BBta_3088  formate dehydrogenase accessory protein  30 
 
 
278 aa  73.2  0.000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009632  SaurJH1_2347  formate dehydrogenase accessory protein  23.9 
 
 
265 aa  73.2  0.000000000004  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4073  formate dehydrogenase family accessory protein FdhD  36.97 
 
 
280 aa  73.2  0.000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.110434  normal  0.0860258 
 
 
-
 
NC_007355  Mbar_A1386  fdhD protein  25.4 
 
 
257 aa  72.4  0.000000000006  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007347  Reut_A0620  formate dehydrogenase accessory protein  27.72 
 
 
288 aa  72  0.000000000008  Ralstonia eutropha JMP134  Bacteria  normal  0.979772  n/a   
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  26.67 
 
 
273 aa  72  0.000000000009  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_010512  Bcenmc03_7065  formate dehydrogenase family accessory protein FdhD  29.55 
 
 
289 aa  71.6  0.00000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.20274  normal  0.543352 
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  32.59 
 
 
284 aa  71.6  0.00000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1205  formate dehydrogenase family accessory protein FdhD  38.14 
 
 
303 aa  71.6  0.00000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.495294 
 
 
-
 
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