More than 300 homologs were found in PanDaTox collection
for query gene Dde_0707 on replicon NC_007519
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. G20



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007519  Dde_0707  formate dehydrogenase accessory protein FdhD, putative  100 
 
 
239 aa  478  1e-134  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1232  formate dehydrogenase accessory protein FdhD, putative  52.83 
 
 
274 aa  233  2.0000000000000002e-60  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0303539 
 
 
-
 
NC_008751  Dvul_2374  formate dehydrogenase, subunit FdhD  55.43 
 
 
262 aa  229  3e-59  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2410  formate dehydrogenase subunit FdhD  43.04 
 
 
240 aa  171  9e-42  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.038103 
 
 
-
 
NC_012918  GM21_2817  formate dehydrogenase family accessory protein FdhD  30.61 
 
 
255 aa  92.8  5e-18  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2264  formate dehydrogenase family accessory protein FdhD  29.66 
 
 
468 aa  91.3  1e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4114  formate dehydrogenase family accessory protein FdhD  30.28 
 
 
293 aa  90.5  2e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1958  formate dehydrogenase family accessory protein FdhD  29.66 
 
 
468 aa  90.5  2e-17  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_3385  formate dehydrogenase family accessory protein FdhD  29.1 
 
 
483 aa  90.1  3e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1840  formate dehydrogenase accessory protein  27.13 
 
 
268 aa  89.4  5e-17  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00380429  n/a   
 
 
-
 
NC_011146  Gbem_1293  formate dehydrogenase family accessory protein FdhD  31.23 
 
 
255 aa  87.8  1e-16  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000222407  n/a   
 
 
-
 
NC_011146  Gbem_1437  formate dehydrogenase family accessory protein FdhD  29.8 
 
 
255 aa  88.2  1e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3370  formate dehydrogenase family accessory protein FdhD  29.34 
 
 
487 aa  87.4  2e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0152  formate dehydrogenase subunit FdhD  29.09 
 
 
228 aa  87  3e-16  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00000189398  n/a   
 
 
-
 
NC_007517  Gmet_1062  formate dehydrogenase, subunit FdhD  28.1 
 
 
479 aa  86.7  3e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0656292 
 
 
-
 
NC_012918  GM21_2990  formate dehydrogenase family accessory protein FdhD  29.64 
 
 
255 aa  85.5  8e-16  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.68227e-19 
 
 
-
 
NC_010424  Daud_2010  formate dehydrogenase family accessory protein FdhD  29.86 
 
 
248 aa  85.1  0.000000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.068526  n/a   
 
 
-
 
NC_009632  SaurJH1_2347  formate dehydrogenase accessory protein  26.25 
 
 
265 aa  85.1  0.000000000000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0145  formate dehydrogenase family accessory protein FdhD  28.57 
 
 
289 aa  84.7  0.000000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2305  formate dehydrogenase accessory protein  26.25 
 
 
265 aa  85.1  0.000000000000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0817  formate dehydrogenase accessory protein  37.4 
 
 
276 aa  84  0.000000000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0766349  n/a   
 
 
-
 
NC_009135  MmarC5_0358  formate dehydrogenase family accessory protein FdhD  23.9 
 
 
233 aa  83.2  0.000000000000004  Methanococcus maripaludis C5  Archaea  normal  0.304436  n/a   
 
 
-
 
NC_009637  MmarC7_0479  formate dehydrogenase family accessory protein FdhD  23.87 
 
 
233 aa  82.4  0.000000000000006  Methanococcus maripaludis C7  Archaea  normal  0.161878  normal 
 
 
-
 
NC_013169  Ksed_15020  formate dehydrogenase family accessory protein FdhD  38.4 
 
 
281 aa  82  0.000000000000007  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.503102  normal 
 
 
-
 
NC_008578  Acel_0667  formate dehydrogenase, subunit FdhD  37.6 
 
 
320 aa  82  0.000000000000008  Acidothermus cellulolyticus 11B  Bacteria  normal  0.187577  normal 
 
 
-
 
NC_014158  Tpau_2346  formate dehydrogenase family accessory protein FdhD  33.9 
 
 
284 aa  81.3  0.00000000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.36394  n/a   
 
 
-
 
NC_005945  BAS3364  formate dehydrogenase accessory protein  22.39 
 
 
265 aa  81.3  0.00000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.144836  n/a   
 
 
-
 
NC_005957  BT9727_3328  formate dehydrogenase accessory protein  22.39 
 
 
265 aa  81.3  0.00000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0183588  n/a   
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  35.98 
 
 
283 aa  81.3  0.00000000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_011773  BCAH820_3578  formate dehydrogenase accessory protein  22.39 
 
 
265 aa  80.9  0.00000000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_3628  formate dehydrogenase accessory protein  22.39 
 
 
265 aa  81.3  0.00000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0719  formate dehydrogenase family accessory protein FdhD  27.78 
 
 
278 aa  81.6  0.00000000000001  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A3595  formate dehydrogenase accessory protein  22.01 
 
 
265 aa  80.5  0.00000000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3278  formate dehydrogenase accessory protein  22.01 
 
 
265 aa  80.9  0.00000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1440  formate dehydrogenase family accessory protein FdhD  23.9 
 
 
233 aa  80.1  0.00000000000003  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  27.56 
 
 
273 aa  79.7  0.00000000000003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_003909  BCE_3585  formate dehydrogenase accessory protein  21.62 
 
 
265 aa  79.3  0.00000000000005  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0919  formate dehydrogenase family accessory protein FdhD  37.01 
 
 
292 aa  79.3  0.00000000000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A3678  formate dehydrogenase accessory protein  22.01 
 
 
265 aa  79.3  0.00000000000005  Bacillus cereus B4264  Bacteria  normal  0.688402  n/a   
 
 
-
 
NC_013132  Cpin_4073  formate dehydrogenase family accessory protein FdhD  40.18 
 
 
280 aa  79  0.00000000000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.110434  normal  0.0860258 
 
 
-
 
NC_009674  Bcer98_0504  formate dehydrogenase accessory protein  22.62 
 
 
269 aa  79  0.00000000000007  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4025  formate dehydrogenase accessory protein FdhD  32.73 
 
 
283 aa  78.6  0.00000000000008  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0802  formate dehydrogenase family accessory protein FdhD  35.94 
 
 
309 aa  78.2  0.00000000000009  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3374  formate dehydrogenase family accessory protein FdhD  27.42 
 
 
260 aa  77.8  0.0000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2076  formate dehydrogenase, subunit FdhD  26.12 
 
 
263 aa  77.4  0.0000000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  9.82479e-16  normal 
 
 
-
 
NC_013093  Amir_1157  formate dehydrogenase family accessory protein FdhD  36.29 
 
 
274 aa  77.4  0.0000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1914  formate dehydrogenase family accessory protein FdhD  34.25 
 
 
285 aa  77.8  0.0000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.84446  hitchhiker  0.0000450272 
 
 
-
 
NC_008010  Dgeo_2744  formate dehydrogenase family accessory protein FdhD  41.96 
 
 
251 aa  76.6  0.0000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0211  formate dehydrogenase accessory protein  25 
 
 
260 aa  77  0.0000000000003  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0780  formate dehydrogenase accessory protein FdhD  26.53 
 
 
478 aa  75.9  0.0000000000006  Geobacter sulfurreducens PCA  Bacteria  normal  0.162723  n/a   
 
 
-
 
NC_003909  BCE_0654  formate dehydrogenase accessory protein  22.54 
 
 
268 aa  75.5  0.0000000000006  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2149  formate dehydrogenase family accessory protein FdhD  28.69 
 
 
282 aa  75.9  0.0000000000006  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0784  formate dehydrogenase family accessory protein FdhD  31.65 
 
 
299 aa  75.5  0.0000000000007  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0758  formate dehydrogenase family accessory protein FdhD  31.65 
 
 
299 aa  75.5  0.0000000000008  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011883  Ddes_0829  formate dehydrogenase family accessory protein FdhD  25.58 
 
 
265 aa  75.1  0.0000000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0159111  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0501  formate dehydrogenase accessory protein  21.51 
 
 
268 aa  75.1  0.0000000000009  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0990  hypothetical protein  27 
 
 
506 aa  75.1  0.0000000000009  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.663742 
 
 
-
 
NC_013517  Sterm_4115  formate dehydrogenase family accessory protein FdhD  25.31 
 
 
255 aa  75.1  0.0000000000009  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.271618  n/a   
 
 
-
 
NC_009051  Memar_1911  formate dehydrogenase family accessory protein FdhD  31.2 
 
 
249 aa  74.7  0.000000000001  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0715  formate dehydrogenase accessory protein  21.51 
 
 
268 aa  74.7  0.000000000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4033  formate dehydrogenase accessory protein  35.11 
 
 
287 aa  75.1  0.000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.681532  normal  0.294632 
 
 
-
 
NC_011772  BCG9842_B4711  formate dehydrogenase accessory protein  22.22 
 
 
268 aa  74.7  0.000000000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1325  formate dehydrogenase  37.5 
 
 
282 aa  74.7  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.201918 
 
 
-
 
NC_007964  Nham_3132  formate dehydrogenase family accessory protein FdhD  38 
 
 
296 aa  73.9  0.000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2277  formate dehydrogenase family accessory protein FdhD  27.16 
 
 
258 aa  73.9  0.000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.181166  normal 
 
 
-
 
NC_013037  Dfer_2665  formate dehydrogenase family accessory protein FdhD  31.3 
 
 
275 aa  74.3  0.000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2306  formate dehydrogenase accessory protein  46.34 
 
 
286 aa  73.2  0.000000000003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0556  formate dehydrogenase accessory protein  21.83 
 
 
268 aa  73.6  0.000000000003  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0498  formate dehydrogenase accessory protein  21.83 
 
 
268 aa  73.6  0.000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0500  formate dehydrogenase accessory protein  21.83 
 
 
268 aa  73.6  0.000000000003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0588  formate dehydrogenase accessory protein  21.83 
 
 
268 aa  73.6  0.000000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  34.35 
 
 
278 aa  73.6  0.000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0644  formate dehydrogenase accessory protein  21.83 
 
 
268 aa  73.6  0.000000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008346  Swol_1030  formate dehydrogenase accessory protein  26.42 
 
 
263 aa  73.2  0.000000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  34.65 
 
 
294 aa  73.6  0.000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013757  Gobs_4473  formate dehydrogenase family accessory protein FdhD  40.95 
 
 
276 aa  73.2  0.000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.979472  n/a   
 
 
-
 
NC_009634  Mevan_0547  formate dehydrogenase family accessory protein FdhD  25.79 
 
 
237 aa  72.8  0.000000000005  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_013173  Dbac_1058  formate dehydrogenase family accessory protein FdhD  29.39 
 
 
264 aa  72.4  0.000000000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0626  formate dehydrogenase accessory protein  21.83 
 
 
268 aa  72.4  0.000000000006  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0466  formate dehydrogenase accessory protein  24.22 
 
 
262 aa  72.4  0.000000000007  Geobacillus sp. WCH70  Bacteria  normal  0.276769  n/a   
 
 
-
 
NC_013205  Aaci_1923  formate dehydrogenase family accessory protein FdhD  26.64 
 
 
280 aa  72  0.000000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3682  formate dehydrogenase subunit FdhD  35.96 
 
 
279 aa  72  0.000000000008  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3577  formate dehydrogenase accessory protein  35.26 
 
 
274 aa  71.6  0.000000000009  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3572  formate dehydrogenase accessory protein  35.26 
 
 
274 aa  71.6  0.000000000009  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3645  formate dehydrogenase accessory protein  35.26 
 
 
274 aa  71.6  0.000000000009  Mycobacterium sp. KMS  Bacteria  normal  normal  0.259742 
 
 
-
 
NC_008254  Meso_2431  formate dehydrogenase family accessory protein FdhD  38.3 
 
 
297 aa  71.2  0.00000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1390  formate dehydrogenase accessory protein FdhD  27.76 
 
 
306 aa  70.9  0.00000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  0.780868  n/a   
 
 
-
 
NC_013131  Caci_0829  formate dehydrogenase family accessory protein FdhD  26.98 
 
 
296 aa  70.9  0.00000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.00158751 
 
 
-
 
NC_008786  Veis_2382  formate dehydrogenase family accessory protein FdhD  25.77 
 
 
277 aa  70.9  0.00000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  33.55 
 
 
297 aa  70.1  0.00000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.224084 
 
 
-
 
NC_007355  Mbar_A1386  fdhD protein  27.19 
 
 
257 aa  70.1  0.00000000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  26.67 
 
 
262 aa  69.7  0.00000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_009565  TBFG_12913  formate dehydrogenase accessory protein  33.55 
 
 
276 aa  69.7  0.00000000004  Mycobacterium tuberculosis F11  Bacteria  normal  0.167876  normal 
 
 
-
 
NC_009712  Mboo_2122  formate dehydrogenase family accessory protein FdhD  38.14 
 
 
259 aa  69.3  0.00000000005  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.545765  normal 
 
 
-
 
NC_007796  Mhun_2204  formate dehydrogenase family accessory protein FdhD  36.78 
 
 
254 aa  69.3  0.00000000005  Methanospirillum hungatei JF-1  Archaea  normal  0.154366  normal  0.450296 
 
 
-
 
NC_007925  RPC_4644  formate dehydrogenase accessory protein  29.95 
 
 
272 aa  69.3  0.00000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  24.1 
 
 
263 aa  69.3  0.00000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009707  JJD26997_1860  formate dehydrogenase accessory protein  24 
 
 
260 aa  68.9  0.00000000006  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_0406  formate dehydrogenase family accessory protein FdhD  26.34 
 
 
284 aa  68.9  0.00000000007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008553  Mthe_0035  formate dehydrogenase family accessory protein FdhD  27.1 
 
 
238 aa  68.9  0.00000000007  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
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