| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0723 |
|---|
| Symbol | |
|---|
| ID | 3910019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 811356 |
|---|
| End bp | 812189 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637882615 |
|---|
| Product | formate dehydrogenase accessory protein |
|---|
| Protein accession | YP_484345 |
|---|
| Protein GI | 86747849 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGC GCCCGACCGC CCACAGCCAG CCGACCCGGA CCTGGCGCAA TGGCCGGATG
CAGGACGGCA CCCGCGCCGT TCCGGAGGAG ACGCCGGTCG CGATCAGCTA CAATGGCGGC
ACCCACGCGG TGATGATGGC GACGCCGGCC GACCTCGAGG ACTTCGCGAT CGGCTTCAGC
CTCGGCGAAG GCGTGATCGC AAACCCATCG CAGATCGACA GCTTGGAGAT CGTGCCGCTC
GACGACGGCG TCGAATTGCG GATGTGGATC GGCGGCGCCG AGGGCGAGCG GCTGCAGCAA
CGCCGCCGCC ATATCGCAGG CCCCACCGGC TGCGGCCTGT GCGGCGTCGA TTCGATCGCC
GAAGCGCTAC GCCCGGCGGC GATCGTGCAT GCCGGCGGCC GGTTCTCGCC GCAGCAGATC
ATCGCCGCGA TCGATGCGCT GCCGCCGCTG CAAGCGCTCA ATATCGAAAC CCGCGCCGTC
CACGGCGCGG CGTTCTGGAC GCCGGCGCGC GGCGTCGTCG CCTTGCGCGA GGACGTCGGC
CGCCACAACG CGCTCGACAA GCTCGCCGGC GCGCTGGCGC GGCAGCAGAT CGTCGCCCGG
GACGGCATCG TGCTGCTCAC CAGCCGCGTC TCGGTCGAAA TGGTGCAGAA GACCGCCGCG
CTCGGCGCGC CTTTGCTGGT CGCCGTCTCC GCACCGACCG CGCTGGCGGT GCGGATGGCG
AACGCCGCCG GCATCACGCT GGCCGCGATC GCGCGCGCCG ACGGCTTCGA AGTGTTCACC
CATCCCGGCC GGATCAGCAG CGGGACGAGC GAGGGAGCCG CCGATGTCGC CTGA
|
|---|
| Protein sequence | MTLRPTAHSQ PTRTWRNGRM QDGTRAVPEE TPVAISYNGG THAVMMATPA DLEDFAIGFS
LGEGVIANPS QIDSLEIVPL DDGVELRMWI GGAEGERLQQ RRRHIAGPTG CGLCGVDSIA
EALRPAAIVH AGGRFSPQQI IAAIDALPPL QALNIETRAV HGAAFWTPAR GVVALREDVG
RHNALDKLAG ALARQQIVAR DGIVLLTSRV SVEMVQKTAA LGAPLLVAVS APTALAVRMA
NAAGITLAAI ARADGFEVFT HPGRISSGTS EGAADVA
|
|---|
| |