More than 300 homologs were found in PanDaTox collection
for query gene BLD_0642 on replicon NC_010816
Organism: Bifidobacterium longum DJO10A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010816  BLD_0642  putative response regulator  100 
 
 
217 aa  430  1e-120  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0565  two component transcriptional regulator, LuxR family  56.74 
 
 
213 aa  209  2e-53  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_10690  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.3 
 
 
215 aa  194  8.000000000000001e-49  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1240  two component LuxR family transcriptional regulator  45.79 
 
 
207 aa  176  3e-43  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0149  DNA-binding response regulator  43.87 
 
 
201 aa  175  4e-43  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1059  two component transcriptional regulator, LuxR family  39.35 
 
 
221 aa  141  7e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  38.32 
 
 
216 aa  137  1e-31  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE2324  DNA-binding response regulator  36.97 
 
 
217 aa  135  4e-31  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  38.32 
 
 
217 aa  135  4e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1656  two component LuxR family transcriptional regulator  35.48 
 
 
224 aa  131  7.999999999999999e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.145564  n/a   
 
 
-
 
NC_011772  BCG9842_B3538  DNA-binding response regulator, LuxR family  35.05 
 
 
223 aa  129  2.0000000000000002e-29  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  42.31 
 
 
216 aa  130  2.0000000000000002e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  34.72 
 
 
211 aa  130  2.0000000000000002e-29  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1863  LuxR family DNA-binding response regulator  35.05 
 
 
218 aa  129  3e-29  Bacillus cereus ATCC 10987  Bacteria  normal  0.345514  n/a   
 
 
-
 
NC_011725  BCB4264_A1802  DNA-binding response regulator, LuxR family  35.05 
 
 
229 aa  129  3e-29  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1913  DNA-binding response regulator, LuxR family  35.05 
 
 
212 aa  129  3e-29  Bacillus cereus AH187  Bacteria  normal  0.605645  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  38.39 
 
 
214 aa  129  3e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_010001  Cphy_0080  two component LuxR family transcriptional regulator  36.24 
 
 
212 aa  129  4.0000000000000003e-29  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1659  LuxR family DNA-binding response regulator  36.24 
 
 
212 aa  129  4.0000000000000003e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1637  response regulator  36.24 
 
 
212 aa  129  4.0000000000000003e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000588398  n/a   
 
 
-
 
NC_007530  GBAA_1791  LuxR family DNA-binding response regulator  36.24 
 
 
212 aa  129  4.0000000000000003e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.276817  n/a   
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  40.19 
 
 
211 aa  128  5.0000000000000004e-29  Frankia sp. EAN1pec  Bacteria  normal  normal  0.265588 
 
 
-
 
NC_011773  BCAH820_1839  DNA-binding response regulator, LuxR family  35.51 
 
 
212 aa  128  6e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  38.89 
 
 
216 aa  128  8.000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  39.53 
 
 
217 aa  127  1.0000000000000001e-28  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  35.07 
 
 
216 aa  126  2.0000000000000002e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1606  response regulator  35.05 
 
 
212 aa  126  3e-28  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  37.33 
 
 
229 aa  124  1e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  37.9 
 
 
234 aa  123  2e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  36.32 
 
 
228 aa  123  2e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_010571  Oter_0647  two component LuxR family transcriptional regulator  34.55 
 
 
225 aa  123  3e-27  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  39.23 
 
 
213 aa  122  5e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  39.07 
 
 
223 aa  122  5e-27  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  39.35 
 
 
220 aa  121  7e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  38.5 
 
 
224 aa  121  7e-27  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  34.12 
 
 
220 aa  121  7e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  36.79 
 
 
212 aa  121  8e-27  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  40 
 
 
227 aa  120  9.999999999999999e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  31.75 
 
 
213 aa  120  9.999999999999999e-27  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  38.74 
 
 
215 aa  120  9.999999999999999e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  35.98 
 
 
242 aa  120  1.9999999999999998e-26  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  35.32 
 
 
219 aa  120  1.9999999999999998e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  37.27 
 
 
225 aa  120  1.9999999999999998e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  38.99 
 
 
233 aa  120  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  36.32 
 
 
212 aa  119  3e-26  Salinispora tropica CNB-440  Bacteria  normal  normal  0.967001 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  37.89 
 
 
234 aa  119  3.9999999999999996e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  37.79 
 
 
228 aa  119  4.9999999999999996e-26  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.94 
 
 
229 aa  119  4.9999999999999996e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  38.68 
 
 
217 aa  118  6e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  39.64 
 
 
216 aa  118  6e-26  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  36.28 
 
 
218 aa  118  7.999999999999999e-26  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  34.6 
 
 
303 aa  118  7.999999999999999e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  34.67 
 
 
220 aa  118  9e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0747  two component transcriptional regulator, LuxR family  31 
 
 
232 aa  117  9.999999999999999e-26  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.643618  normal  0.38139 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  34.72 
 
 
241 aa  117  9.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  37.09 
 
 
219 aa  116  1.9999999999999998e-25  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  37.73 
 
 
215 aa  117  1.9999999999999998e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  38.18 
 
 
217 aa  117  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  36.15 
 
 
217 aa  117  1.9999999999999998e-25  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  36.15 
 
 
217 aa  117  1.9999999999999998e-25  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  37.04 
 
 
216 aa  116  1.9999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  38.89 
 
 
220 aa  116  3e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_009997  Sbal195_1319  two component LuxR family transcriptional regulator  33.97 
 
 
216 aa  116  3e-25  Shewanella baltica OS195  Bacteria  normal  0.0542522  decreased coverage  0.000972679 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  34.6 
 
 
235 aa  115  3e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  36.99 
 
 
230 aa  115  3e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  36.28 
 
 
222 aa  116  3e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  37.04 
 
 
244 aa  115  3e-25  Frankia sp. EAN1pec  Bacteria  normal  normal  0.322421 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  37.61 
 
 
226 aa  116  3e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013205  Aaci_0655  two component transcriptional regulator, LuxR family  37.5 
 
 
200 aa  115  3.9999999999999997e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.91 
 
 
226 aa  115  3.9999999999999997e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  36.62 
 
 
220 aa  115  5e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  38.43 
 
 
221 aa  115  5e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  38.25 
 
 
225 aa  115  6e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  35.16 
 
 
221 aa  115  6e-25  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  37.62 
 
 
211 aa  115  6e-25  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  37.74 
 
 
221 aa  115  6.9999999999999995e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013169  Ksed_06250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.79 
 
 
228 aa  115  6.9999999999999995e-25  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  36.92 
 
 
253 aa  115  6.9999999999999995e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  40.57 
 
 
241 aa  115  6.9999999999999995e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.62 
 
 
221 aa  114  7.999999999999999e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  37.33 
 
 
226 aa  114  7.999999999999999e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013595  Sros_3524  response regulator receiver protein  35.41 
 
 
214 aa  114  7.999999999999999e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0390864  normal 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  36.77 
 
 
241 aa  114  8.999999999999998e-25  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  36.79 
 
 
211 aa  114  8.999999999999998e-25  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  38.64 
 
 
218 aa  114  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  34.56 
 
 
214 aa  114  1.0000000000000001e-24  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  36.07 
 
 
225 aa  114  1.0000000000000001e-24  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  36.53 
 
 
214 aa  114  1.0000000000000001e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  33.65 
 
 
218 aa  113  2.0000000000000002e-24  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  36.68 
 
 
234 aa  113  2.0000000000000002e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.76 
 
 
239 aa  113  2.0000000000000002e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.711047 
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  36.24 
 
 
225 aa  113  2.0000000000000002e-24  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.665179 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  36.49 
 
 
218 aa  113  2.0000000000000002e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_011663  Sbal223_3070  two component transcriptional regulator, LuxR family  33.49 
 
 
216 aa  113  2.0000000000000002e-24  Shewanella baltica OS223  Bacteria  decreased coverage  0.000689776  unclonable  0.00000000000283062 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  33.8 
 
 
219 aa  113  3e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  33.96 
 
 
216 aa  112  3e-24  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_009052  Sbal_1241  two component LuxR family transcriptional regulator  33.49 
 
 
216 aa  112  3e-24  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000399601  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  37.22 
 
 
232 aa  112  4.0000000000000004e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  36.57 
 
 
225 aa  112  4.0000000000000004e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  38.53 
 
 
222 aa  112  5e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
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