More than 300 homologs were found in PanDaTox collection
for query gene Amuc_1001 on replicon NC_010655
Organism: Akkermansia muciniphila ATCC BAA-835



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010655  Amuc_1001  short chain dehydrogenase  100 
 
 
301 aa  619  1e-176  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.903414 
 
 
-
 
NC_013165  Shel_18450  short chain dehydrogenase  74.91 
 
 
279 aa  439  9.999999999999999e-123  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0882393  normal 
 
 
-
 
NC_014150  Bmur_2508  short-chain dehydrogenase/reductase SDR  60.15 
 
 
277 aa  329  4e-89  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0215  short chain dehydrogenase  56.46 
 
 
275 aa  311  5.999999999999999e-84  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4340  short chain dehydrogenase  39.85 
 
 
280 aa  178  8e-44  Frankia sp. EAN1pec  Bacteria  normal  0.0293254  normal 
 
 
-
 
NC_013093  Amir_3000  short chain dehydrogenase  37.69 
 
 
272 aa  170  3e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0641388  n/a   
 
 
-
 
NC_009921  Franean1_4594  short-chain dehydrogenase/reductase SDR  31.39 
 
 
306 aa  111  2.0000000000000002e-23  Frankia sp. EAN1pec  Bacteria  normal  normal  0.90193 
 
 
-
 
NC_009921  Franean1_4740  short-chain dehydrogenase/reductase SDR  31.5 
 
 
285 aa  94.7  2e-18  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0344  short-chain dehydrogenase/reductase SDR  27.88 
 
 
278 aa  89.7  5e-17  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0130127 
 
 
-
 
NC_012669  Bcav_0126  short-chain dehydrogenase/reductase SDR  28.28 
 
 
247 aa  85.9  8e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5611  short-chain dehydrogenase/reductase SDR  27.7 
 
 
279 aa  84.3  0.000000000000002  Mycobacterium sp. JLS  Bacteria  normal  0.288274  normal  0.29741 
 
 
-
 
NC_007348  Reut_B5463  Short-chain dehydrogenase/reductase SDR  30.29 
 
 
251 aa  83.6  0.000000000000004  Ralstonia eutropha JMP134  Bacteria  normal  0.230582  n/a   
 
 
-
 
NC_012669  Bcav_3510  short-chain dehydrogenase/reductase SDR  28.94 
 
 
251 aa  82.8  0.000000000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.439576 
 
 
-
 
NC_009485  BBta_0919  putative oxidoreductase  27.7 
 
 
257 aa  82.4  0.000000000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.902502  normal  0.888241 
 
 
-
 
NC_013411  GYMC61_1779  short-chain dehydrogenase/reductase SDR  31.12 
 
 
249 aa  82  0.00000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_5812  short-chain dehydrogenase/reductase SDR  26.22 
 
 
280 aa  82  0.00000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.439013  normal 
 
 
-
 
NC_009338  Mflv_1024  short-chain dehydrogenase/reductase SDR  28 
 
 
277 aa  81.3  0.00000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4012  short-chain dehydrogenase/reductase SDR  26.18 
 
 
276 aa  81.3  0.00000000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3603  short-chain dehydrogenase/reductase SDR  28.11 
 
 
249 aa  79.7  0.00000000000006  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5682  short-chain dehydrogenase/reductase SDR  27.54 
 
 
239 aa  77.8  0.0000000000002  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0346  short-chain dehydrogenase/reductase SDR  29.12 
 
 
256 aa  77.4  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0244456  n/a   
 
 
-
 
NC_014158  Tpau_3804  short-chain dehydrogenase/reductase SDR  26.57 
 
 
253 aa  77.8  0.0000000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5319  short-chain dehydrogenase/reductase SDR  27.17 
 
 
266 aa  78.2  0.0000000000002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.64422 
 
 
-
 
NC_014212  Mesil_0154  short-chain dehydrogenase/reductase SDR  25.9 
 
 
255 aa  77.4  0.0000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.649375  normal  0.270956 
 
 
-
 
NC_008146  Mmcs_2791  short chain dehydrogenase  29.41 
 
 
256 aa  77.4  0.0000000000003  Mycobacterium sp. MCS  Bacteria  normal  0.298424  n/a   
 
 
-
 
NC_008705  Mkms_2835  short chain dehydrogenase  29.41 
 
 
256 aa  77.4  0.0000000000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2818  short chain dehydrogenase  29.41 
 
 
256 aa  77.4  0.0000000000003  Mycobacterium sp. JLS  Bacteria  normal  0.101264  normal 
 
 
-
 
NC_007492  Pfl01_4142  short chain dehydrogenase  28.52 
 
 
272 aa  76.6  0.0000000000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.553245  normal 
 
 
-
 
NC_009485  BBta_5098  putative short-chain dehydrogenase/reductase SDR  26.95 
 
 
255 aa  76.6  0.0000000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0080  short-chain dehydrogenase/reductase SDR  27.02 
 
 
263 aa  76.3  0.0000000000006  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2517  short-chain dehydrogenase/reductase SDR  27.92 
 
 
257 aa  75.9  0.0000000000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.401645  n/a   
 
 
-
 
NC_013730  Slin_2303  short-chain dehydrogenase/reductase SDR  25.44 
 
 
269 aa  75.5  0.000000000001  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.00148918 
 
 
-
 
NC_009486  Tpet_0479  short-chain dehydrogenase/reductase SDR  24.47 
 
 
252 aa  75.1  0.000000000001  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2992  short chain dehydrogenase  29.21 
 
 
269 aa  75.5  0.000000000001  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0729  short-chain dehydrogenase/reductase SDR  24.15 
 
 
251 aa  75.1  0.000000000001  Petrotoga mobilis SJ95  Bacteria  normal  0.0262547  n/a   
 
 
-
 
NC_010483  TRQ2_0494  short-chain dehydrogenase/reductase SDR  24.47 
 
 
252 aa  75.5  0.000000000001  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2119  short-chain dehydrogenase/reductase SDR  27.97 
 
 
257 aa  75.5  0.000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0833  short-chain dehydrogenase/reductase SDR  28.57 
 
 
264 aa  75.1  0.000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.943755 
 
 
-
 
NC_009012  Cthe_1433  short-chain dehydrogenase/reductase SDR  25.63 
 
 
257 aa  75.5  0.000000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1173  short-chain dehydrogenase/reductase SDR  26.01 
 
 
256 aa  74.7  0.000000000002  Clostridium cellulolyticum H10  Bacteria  normal  0.0283651  n/a   
 
 
-
 
NC_011071  Smal_3492  short-chain dehydrogenase/reductase SDR  29.45 
 
 
267 aa  74.7  0.000000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.563109 
 
 
-
 
NC_009487  SaurJH9_2499  short chain dehydrogenase  26.21 
 
 
272 aa  74.3  0.000000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.496805  n/a   
 
 
-
 
NC_009632  SaurJH1_2549  short chain dehydrogenase  26.21 
 
 
272 aa  74.3  0.000000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1641  short-chain dehydrogenase/reductase SDR  27.9 
 
 
255 aa  73.9  0.000000000003  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000170009  n/a   
 
 
-
 
NC_013159  Svir_17790  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  28.12 
 
 
288 aa  73.6  0.000000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.40467 
 
 
-
 
NC_007778  RPB_2264  Short-chain dehydrogenase/reductase SDR  27.66 
 
 
255 aa  73.6  0.000000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.136651  normal 
 
 
-
 
NC_008254  Meso_3782  short-chain dehydrogenase/reductase SDR  26.62 
 
 
258 aa  73.6  0.000000000004  Chelativorans sp. BNC1  Bacteria  normal  0.143319  n/a   
 
 
-
 
NC_012856  Rpic12D_2582  short chain dehydrogenase  28.52 
 
 
269 aa  73.6  0.000000000004  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3705  short-chain dehydrogenase/reductase SDR  28.01 
 
 
255 aa  73.6  0.000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.551214  n/a   
 
 
-
 
NC_008009  Acid345_0026  short-chain dehydrogenase/reductase SDR  27.54 
 
 
249 aa  73.2  0.000000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.94443  normal 
 
 
-
 
NC_004310  BR1629  short chain dehydrogenase  29.35 
 
 
257 aa  72.8  0.000000000006  Brucella suis 1330  Bacteria  normal  0.974158  n/a   
 
 
-
 
NC_012918  GM21_3729  short-chain dehydrogenase/reductase SDR  28.88 
 
 
249 aa  72.8  0.000000000006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008146  Mmcs_2060  short chain dehydrogenase  24.64 
 
 
257 aa  73.2  0.000000000006  Mycobacterium sp. MCS  Bacteria  normal  0.256692  n/a   
 
 
-
 
NC_008705  Mkms_2106  short chain dehydrogenase  24.64 
 
 
257 aa  73.2  0.000000000006  Mycobacterium sp. KMS  Bacteria  normal  normal  0.077628 
 
 
-
 
NC_009077  Mjls_2043  short chain dehydrogenase  24.64 
 
 
257 aa  73.2  0.000000000006  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2515  short-chain dehydrogenase/reductase SDR  28.68 
 
 
250 aa  72.4  0.000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009505  BOV_1573  short chain dehydrogenase  29.35 
 
 
257 aa  72.4  0.000000000009  Brucella ovis ATCC 25840  Bacteria  normal  0.0631529  n/a   
 
 
-
 
NC_011725  BCB4264_A3466  glucose 1-dehydrogenase  28.32 
 
 
247 aa  72  0.00000000001  Bacillus cereus B4264  Bacteria  normal  0.0764776  n/a   
 
 
-
 
NC_007498  Pcar_1364  putative glucose/ribitol dehydrogenase  27.3 
 
 
257 aa  72  0.00000000001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  8.333439999999999e-20  n/a   
 
 
-
 
NC_007509  Bcep18194_C7132  Short-chain dehydrogenase/reductase SDR  25.98 
 
 
257 aa  71.6  0.00000000001  Burkholderia sp. 383  Bacteria  normal  0.928828  normal 
 
 
-
 
NC_009338  Mflv_4062  short chain dehydrogenase  24.64 
 
 
257 aa  72  0.00000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.171649  normal  0.787909 
 
 
-
 
NC_012669  Bcav_2974  short-chain dehydrogenase/reductase SDR  26.69 
 
 
259 aa  72  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1274  short-chain dehydrogenase/reductase SDR  24.82 
 
 
251 aa  72  0.00000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.062755  normal 
 
 
-
 
NC_004578  PSPTO_1056  oxidoreductase, short chain dehydrogenase/reductase family  26.64 
 
 
254 aa  71.6  0.00000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1935  putative short-chain alcohol dehydrogenase  27.68 
 
 
267 aa  70.9  0.00000000002  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000230306  normal  0.160662 
 
 
-
 
NC_012669  Bcav_2143  short-chain dehydrogenase/reductase SDR  27.92 
 
 
251 aa  71.2  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  decreased coverage  0.00162277  normal 
 
 
-
 
NC_013946  Mrub_2554  short-chain dehydrogenase/reductase SDR  27.24 
 
 
258 aa  70.9  0.00000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.465274  normal 
 
 
-
 
NC_013517  Sterm_1363  short-chain dehydrogenase/reductase SDR  26.37 
 
 
254 aa  71.2  0.00000000002  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.0000027503  n/a   
 
 
-
 
NC_009954  Cmaq_1757  3-ketoacyl-(acyl-carrier-protein) reductase  26.13 
 
 
302 aa  71.2  0.00000000002  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_008528  OEOE_0693  acetoin reductase  27.64 
 
 
259 aa  71.6  0.00000000002  Oenococcus oeni PSU-1  Bacteria  normal  0.0373787  n/a   
 
 
-
 
NC_008726  Mvan_2281  short chain dehydrogenase  23.4 
 
 
257 aa  71.6  0.00000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.121478 
 
 
-
 
NC_008752  Aave_2790  short-chain dehydrogenase/reductase SDR  25.35 
 
 
269 aa  70.9  0.00000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2148  short-chain dehydrogenase/reductase SDR  26.2 
 
 
247 aa  70.5  0.00000000003  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_19640  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  35.71 
 
 
261 aa  70.9  0.00000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009954  Cmaq_0054  short-chain dehydrogenase/reductase SDR  26.1 
 
 
283 aa  70.5  0.00000000004  Caldivirga maquilingensis IC-167  Archaea  normal  0.419965  normal 
 
 
-
 
NC_011894  Mnod_2723  short-chain dehydrogenase/reductase SDR  29.35 
 
 
251 aa  70.1  0.00000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2377  short-chain dehydrogenase/reductase SDR  26.39 
 
 
249 aa  70.5  0.00000000004  Paracoccus denitrificans PD1222  Bacteria  normal  0.496864  normal  0.812615 
 
 
-
 
NC_005945  BAS4612  glucose-1-dehydrogenase  25.82 
 
 
261 aa  70.1  0.00000000005  Bacillus anthracis str. Sterne  Bacteria  normal  0.548081  n/a   
 
 
-
 
NC_006274  BCZK4466  glucose-1-dehydrogenase  25.45 
 
 
261 aa  70.1  0.00000000005  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4968  glucose-1-dehydrogenase  25.82 
 
 
261 aa  70.1  0.00000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.188198  n/a   
 
 
-
 
NC_007951  Bxe_A3604  putative dehydrogenase  26.05 
 
 
281 aa  69.7  0.00000000005  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000000055827  normal 
 
 
-
 
NC_007951  Bxe_A3615  putative dehydrogenase  25.71 
 
 
291 aa  69.7  0.00000000005  Burkholderia xenovorans LB400  Bacteria  normal  0.427411  normal 
 
 
-
 
NC_008010  Dgeo_2865  short-chain dehydrogenase/reductase SDR  24.36 
 
 
255 aa  70.1  0.00000000005  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  27.66 
 
 
254 aa  70.1  0.00000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_0075  short-chain dehydrogenase/reductase SDR  27.68 
 
 
250 aa  70.1  0.00000000005  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0303  acetoin reductase  26.28 
 
 
257 aa  69.3  0.00000000008  Pectobacterium wasabiae WPP163  Bacteria  normal  0.506804  n/a   
 
 
-
 
NC_011772  BCG9842_B1783  glucose 1-dehydrogenase  27.6 
 
 
247 aa  69.3  0.00000000008  Bacillus cereus G9842  Bacteria  normal  0.88349  normal 
 
 
-
 
NC_008786  Veis_3774  short chain dehydrogenase  27.05 
 
 
258 aa  69.3  0.00000000008  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.644601  normal  0.413475 
 
 
-
 
NC_012850  Rleg_0298  sorbitol dehydrogenase  27.24 
 
 
262 aa  68.9  0.00000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.514875  normal 
 
 
-
 
NC_004578  PSPTO_2397  oxidoreductase, short chain dehydrogenase/reductase family  28.32 
 
 
254 aa  68.9  0.00000000009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0465114  n/a   
 
 
-
 
NC_013037  Dfer_0269  short-chain dehydrogenase/reductase SDR  26.26 
 
 
249 aa  68.9  0.00000000009  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.523448  normal  0.530069 
 
 
-
 
NC_007925  RPC_3478  short-chain dehydrogenase/reductase SDR  25.53 
 
 
255 aa  68.9  0.00000000009  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3206  short-chain dehydrogenase/reductase SDR  26.95 
 
 
255 aa  68.9  0.00000000009  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4712  short-chain dehydrogenase/reductase SDR  28.93 
 
 
247 aa  68.9  0.00000000009  Frankia sp. EAN1pec  Bacteria  normal  normal  0.264326 
 
 
-
 
NC_008146  Mmcs_5231  short chain dehydrogenase  26.69 
 
 
252 aa  68.9  0.00000000009  Mycobacterium sp. MCS  Bacteria  normal  0.0476444  n/a   
 
 
-
 
NC_009674  Bcer98_3132  glucose-1-dehydrogenase  25.99 
 
 
261 aa  68.9  0.00000000009  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2751  short-chain dehydrogenase/reductase SDR  25.96 
 
 
252 aa  68.6  0.0000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal 
 
 
-
 
NC_013946  Mrub_2062  short-chain dehydrogenase/reductase SDR  24.19 
 
 
256 aa  68.6  0.0000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.624972 
 
 
-
 
NC_010512  Bcenmc03_6883  short-chain dehydrogenase/reductase SDR  25.71 
 
 
277 aa  68.6  0.0000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  27.3 
 
 
254 aa  68.6  0.0000000001  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
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