Gene Sked_19640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19640 
Symbol 
ID8633599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2187930 
End bp2188715 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content73% 
IMG OID 
Productdehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein 
Protein accessionYP_003314723 
Protein GI269795268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCA CCGAGCACAC GCGCACCGTC CTCGTCACCG GCTCCACCAG CGGCATCGGC 
GCCGCGACCG CCCGCACCCT CGCCGCCCAG GGGTGGCGCG TGATCGTCAC CGGTCGCGAC
AGGTCCCGCG GGGACGCCGT CGTCGCGGAG ATCGACGACC TCGCCGCGGC GGGTGACGGC
GTCGACGTCC CGCACGCCGT CTTCGTCCCC TCCGACCTGG CTGCCGCGCC CGACGTCCTG
CGTGAGCTCG CCGCCGCAGT GACTGAGGTG GCTGGCGGGC GGCTCGACGC GATCGTGCAC
AACGCCGCAC TGTGCCCATC CGTCGACACC GTCTCCCTCA CCGACGCCGA CCTCGAGGCC
ACCCTCGCGG TGAACGTCCG CGCACCCCAC GTCCTCACCG CCGCACTCGC CCCGGCGATG
GCCGAGCGCG GCCACGGGGC CATCGTCGTC ATCGGGTCGT GGATGGCCCA CATCGGGCAC
CCCATCGTCG GGCTGTACTC AGCGTCCAAG GCCGCCGAGA TCCAGCTCGC CCGCAGCTGG
GCCGCAGAGT TCGGGCCCCG CGGGGTGCGC GTCAACACGG TCTCCCCCGG TGCGACCCGG
ACGCCGATCA ACGCGACTGA TGGGGACGTC ATCGCTGCGA TGACCGCTCC GACGCCGGCT
GGGCGACCTG GGACGCCTGA GGAGGTTGCT GATGCTGTGG CGTGGCTGCT CTCCGACCGG
GCTGGGTACA TCCACGGAGC GGAGATCGCG GTGGACGGTG GGATTACGGC GGCGCGGACT
GCTTAG
 
Protein sequence
MTTTEHTRTV LVTGSTSGIG AATARTLAAQ GWRVIVTGRD RSRGDAVVAE IDDLAAAGDG 
VDVPHAVFVP SDLAAAPDVL RELAAAVTEV AGGRLDAIVH NAALCPSVDT VSLTDADLEA
TLAVNVRAPH VLTAALAPAM AERGHGAIVV IGSWMAHIGH PIVGLYSASK AAEIQLARSW
AAEFGPRGVR VNTVSPGATR TPINATDGDV IAAMTAPTPA GRPGTPEEVA DAVAWLLSDR
AGYIHGAEIA VDGGITAART A