| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1274 |
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| Symbol | |
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| ID | 5322121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1367174 |
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| End bp | 1367929 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790215 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001326959 |
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| Protein GI | 150396492 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.062755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCG GCTTGGAAGA AAAGATCGCA ATCGTGACCG GCGGAGGGTC CGGCATCGGC
GCCGCAGTGT CAAGACAGCT TGGCGGTGAG GGCGCTGAAG TCATCGTTGC CGACCGCGAC
GCCGATGCGG CGCGCACCGT CGCAGCCGAG ATTCGCTCGA ATGGGGGGAA GGCTCGGGAT
TTCACCGTCG ACGTTGCCGA TTCGGCAGCG GTGGAGCAAA TGGTCGCTTT CGCCGTGCGG
GAATGCGGCG GCTTGCATCT GGCGGTCAAC AATGCCGGCG TCGAGGGCCC ACGCAGAGCG
ACCGCGGACT ATCCGCTCGA GGATTGGCGC AGGCTGATCG AAGTCAATCT GAATGGGGTG
TTCTACTGTA TGAAATACGA GATCGCCGCC ATGCTCGGAA AGGGAGGCGG GGCCATCGTC
AACATGTCCT CGATTCTGGG CGCCGTCGCA TTGCCAACCG CGTCCGCCTA CACGGCAGCC
AAGCATGGGG TCGTGGGGCT CACCAAGGCG GCCGGTATTG AGTATGCGAG AATGGGCATT
CGCATCAATG CGGTCGGCCC GGGCTGGATC GAGACGCCGC TCCTGTCGGA GCACTCGGAA
CTTGCGAAAA CGCGGCGCCT CGAAGCACTG CAGCCGCTCG GCCGGCGCGG AAAACCCGAG
GAGGTCGCGT CACTCGTCTG TTTCCTGCTG TCGGAGCAGG CGAGTTTCAT TACCGGCAGC
TATCACCCGG TCGACGGAGC TTTCACGGCC CATTAG
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| Protein sequence | MKLGLEEKIA IVTGGGSGIG AAVSRQLGGE GAEVIVADRD ADAARTVAAE IRSNGGKARD
FTVDVADSAA VEQMVAFAVR ECGGLHLAVN NAGVEGPRRA TADYPLEDWR RLIEVNLNGV
FYCMKYEIAA MLGKGGGAIV NMSSILGAVA LPTASAYTAA KHGVVGLTKA AGIEYARMGI
RINAVGPGWI ETPLLSEHSE LAKTRRLEAL QPLGRRGKPE EVASLVCFLL SEQASFITGS
YHPVDGAFTA H
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