Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_2818 |
Symbol | |
ID | 4878532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 2925651 |
End bp | 2926421 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640140113 |
Product | short chain dehydrogenase |
Protein accession | YP_001071089 |
Protein GI | 126435398 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.101264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG CCGAAATGAC CGTGGATCTC GACTTCTCAC TGACCGGGAA GGTCGCACTG GTCACCGGCG GCGCATCGGG CATCGGTGCG GCGATCGCAT CGGCGTTCGC CGCCAAGGGC GCCCGCGTGG CCGTGGCCGA CCTCAACGAA CCCGGTGCAC AGGCGCACGC CGCGGCGTTG GCCACCGAGA GTTCGGGATT CCGTTGCGAT GTCAGCGATC CCGCGTCCGT CGCGGCGACC GTCGACGCCG TGGCCGGCAC CTTCGGCAGG ATCGACATCC TGGTCAACAG TGCCGGGGTG GCCCGGCTGG CGCCCGCCGA GGACCTCACG CTCACCGACT GGGAGTCGAC GATCGACATC AACCTCAAGG GCACGTTCCT GATGTGCCAG GCGGTGGGCC GCCGCATGCT GGCCGACGGT GGCGGCAGCA TCGTCAACCT GGCGTCTCAG GCCGCCTCCG TGGCACTCGA CCAGCACGTG GCGTACTGCG CGTCGAAGTT CGGGGTGGTC GGGGTGTCGA AGGTCCTGGC CGCCGAATGG GGCGGGCGGG GCATCCGGGT CAACACGATC TCGCCCACGG TGGTCCTCAC CGAACTGGGC CACAAGGCCT GGGACGGACC GCGCGGCGAT GCCCTCAAGA AGCTGATCCC CATCGGCCGG TTCGCCTACC CGCCCGAGAT CGCCGCCGCC GCGGTCTACC TCGCCTCCGA CGCGGCCGCG ATGGTCACCG GCGCCGACCT GGTCGTCGAC GGCGGCTACA CCGTCAAATA G
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Protein sequence | MTDAEMTVDL DFSLTGKVAL VTGGASGIGA AIASAFAAKG ARVAVADLNE PGAQAHAAAL ATESSGFRCD VSDPASVAAT VDAVAGTFGR IDILVNSAGV ARLAPAEDLT LTDWESTIDI NLKGTFLMCQ AVGRRMLADG GGSIVNLASQ AASVALDQHV AYCASKFGVV GVSKVLAAEW GGRGIRVNTI SPTVVLTELG HKAWDGPRGD ALKKLIPIGR FAYPPEIAAA AVYLASDAAA MVTGADLVVD GGYTVK
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