| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2818 |
|---|
| Symbol | |
|---|
| ID | 4878532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 2925651 |
|---|
| End bp | 2926421 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640140113 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001071089 |
|---|
| Protein GI | 126435398 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.101264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG CCGAAATGAC CGTGGATCTC GACTTCTCAC TGACCGGGAA GGTCGCACTG
GTCACCGGCG GCGCATCGGG CATCGGTGCG GCGATCGCAT CGGCGTTCGC CGCCAAGGGC
GCCCGCGTGG CCGTGGCCGA CCTCAACGAA CCCGGTGCAC AGGCGCACGC CGCGGCGTTG
GCCACCGAGA GTTCGGGATT CCGTTGCGAT GTCAGCGATC CCGCGTCCGT CGCGGCGACC
GTCGACGCCG TGGCCGGCAC CTTCGGCAGG ATCGACATCC TGGTCAACAG TGCCGGGGTG
GCCCGGCTGG CGCCCGCCGA GGACCTCACG CTCACCGACT GGGAGTCGAC GATCGACATC
AACCTCAAGG GCACGTTCCT GATGTGCCAG GCGGTGGGCC GCCGCATGCT GGCCGACGGT
GGCGGCAGCA TCGTCAACCT GGCGTCTCAG GCCGCCTCCG TGGCACTCGA CCAGCACGTG
GCGTACTGCG CGTCGAAGTT CGGGGTGGTC GGGGTGTCGA AGGTCCTGGC CGCCGAATGG
GGCGGGCGGG GCATCCGGGT CAACACGATC TCGCCCACGG TGGTCCTCAC CGAACTGGGC
CACAAGGCCT GGGACGGACC GCGCGGCGAT GCCCTCAAGA AGCTGATCCC CATCGGCCGG
TTCGCCTACC CGCCCGAGAT CGCCGCCGCC GCGGTCTACC TCGCCTCCGA CGCGGCCGCG
ATGGTCACCG GCGCCGACCT GGTCGTCGAC GGCGGCTACA CCGTCAAATA G
|
|---|
| Protein sequence | MTDAEMTVDL DFSLTGKVAL VTGGASGIGA AIASAFAAKG ARVAVADLNE PGAQAHAAAL
ATESSGFRCD VSDPASVAAT VDAVAGTFGR IDILVNSAGV ARLAPAEDLT LTDWESTIDI
NLKGTFLMCQ AVGRRMLADG GGSIVNLASQ AASVALDQHV AYCASKFGVV GVSKVLAAEW
GGRGIRVNTI SPTVVLTELG HKAWDGPRGD ALKKLIPIGR FAYPPEIAAA AVYLASDAAA
MVTGADLVVD GGYTVK
|
|---|
| |