| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0126 |
|---|
| Symbol | |
|---|
| ID | 7859291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 131629 |
|---|
| End bp | 132372 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643864203 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002880153 |
|---|
| Protein GI | 229818627 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTCA GGTCCACACG ACGTGCGCTG GTCACGGGGG CGGCGAGCGG CATCGGTGCC
GCTGTGGCGC ACCGCCTCGC TCTGGCGGGG ATGGCGGTCG TCTGCGCGGA CGTGGACGTC
GACGGCGCCG GGCGCGTCGC TGCCGAGACC GGGGGTGACC CGCTCGAGCT CGACCTCCGG
TCGGTCCCGG ACGACCTCGG CGACCGCCTC GGGTATCTGG ACGTGCTCGT CAGCTGCGCC
GGCGTCGCCG ACTCGACGCC GACGAGCGAC CTGGACGTCG CCGGATACCG GCGCGTCATG
GAGATCAACC TGGACGGGAC GGTCGCGGTC ACGCTCGCCG TCCTGCCGCT GCTCCGGGCC
GCCGCCTCGG GGCGCGTCCT CACCATCTCG TCGGTGCAGG GCTTCCGGGC CGCCGCCGAC
ACGCTCGCCT ATGCCACCAG CAAGGGCGCC CTGGTGACGT TCACCCGTGC CCTCGCCGTC
GACGTCGCCG AGGACGGCGT GCTCGTCAAC GCGCTCGCCC CGGGCTTCGT CGACACGCCG
ATGGCGCGGA TGCCGGACGG GACGCGGGAG TACGACACCC CCTGGTTCCG CAGCGTGTAC
GTCGAGCACG CCCGCATCCC GATGCGCCGC CCCGGCACCG CTGACGAGGT GGCCGCGGCC
GCGGAGTTCT TCGTCTCGCC CACCAACACC TATGTCACGG GCCAGGTGCT CGCCGTCGAC
GGCGGGCTCA TGGCGACCTT CTGA
|
|---|
| Protein sequence | MPVRSTRRAL VTGAASGIGA AVAHRLALAG MAVVCADVDV DGAGRVAAET GGDPLELDLR
SVPDDLGDRL GYLDVLVSCA GVADSTPTSD LDVAGYRRVM EINLDGTVAV TLAVLPLLRA
AASGRVLTIS SVQGFRAAAD TLAYATSKGA LVTFTRALAV DVAEDGVLVN ALAPGFVDTP
MARMPDGTRE YDTPWFRSVY VEHARIPMRR PGTADEVAAA AEFFVSPTNT YVTGQVLAVD
GGLMATF
|
|---|
| |