Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2143 |
Symbol | |
ID | 7859504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2414348 |
End bp | 2415103 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643866235 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002882157 |
Protein GI | 229820631 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00162277 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAACC CGTTCGACCT GTCAGGCCGC GTGGCCTTTG TCACCGGAGG TGCCCAGGGG ATCGGCGAGG CGGTGTCCGT CGGTCTGCGC GACGCCGGGG CGCGCGTGGT GATCGGCGAC CTCAACGCTG AGATCGGGGA GGCGACGGCG GAGCGGCTCG GCGTCGACTT CGTGCAGCTC GACGTGACGG ACTCTGCGAG CGTGGACGCC GCCGTCGGGC ACGTCGTCTC GGAGTTCGGG TCGATCGACG TGGCCGTGAA CAACGCCGGG ATCGTGACGA ACACGCCGGC CGAGGAGATG GGCGACGACG AGTGGCGGCG GGTGCTCGCC GTCGACCTCG ACGGCGTCTT CTACTGCTGC CGTGCCGAGG GCCGGGCGAT GCTCGCCGCG GGCCGCGGGA CCATCATCAA CACGGGTTCC ATGAGCGGAC ACATCTCGAA CCACCCGCAG CCGCAGTCGT CGTACAACGC GGCGAAGGCC GGCGTCATCC ACCTGACGAA GTCGCTGGCG GGGGAGTGGG CCTCGCGCGG TGTGCGGGTG AACTCGATCT CGCCGGGGTA CATCGGGACC GAGCTGACTC GCCGGGGGCT CGAGCTGCAG CCGGAGTGGG GCAAGACGTG GATCGGCGGG ACGCCGCTGG GGCGGGTCGG GGAGCCTGCC GAGCTGGCGC CGGCGGTGGT GTTCCTGGCG TCCGACGCGT CGAGCTTCTG CACCGGCACC GACCTGGTGA TCGACGGCGG CTACACCGTC TGGTGA
|
Protein sequence | MTNPFDLSGR VAFVTGGAQG IGEAVSVGLR DAGARVVIGD LNAEIGEATA ERLGVDFVQL DVTDSASVDA AVGHVVSEFG SIDVAVNNAG IVTNTPAEEM GDDEWRRVLA VDLDGVFYCC RAEGRAMLAA GRGTIINTGS MSGHISNHPQ PQSSYNAAKA GVIHLTKSLA GEWASRGVRV NSISPGYIGT ELTRRGLELQ PEWGKTWIGG TPLGRVGEPA ELAPAVVFLA SDASSFCTGT DLVIDGGYTV W
|
| |