Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4142 |
Symbol | |
ID | 3712624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4681364 |
End bp | 4682182 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | short chain dehydrogenase |
Protein accession | YP_349870 |
Protein GI | 77460363 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.553245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAC CTCTGTCCCT GCCACCGGTG CCCGAGCCAC CAAAAGGCGA GCGTCTGAAA AACAAGGTTG TGTTGCTGAC CGGCGCCGCC CAAGGCATCG GCGAAGCAAT CGTCGCGACC TTCGCCTCCC AGCAGGCCAA ACTGGTGATC AGCGATATCC AGGCCGAAAA GGTCGAGAAA GTCGCCGCCC ACTGGCGCGA GCAGGGCGCC GATGTGCAAG CGATCAAGGC CGACGTATCG CGTCAGCAGG ATCTGCACGC CATGGCCAAA CTGGCCATCG AACTGCACGG GCGCATCGAC GTGCTGGTCA ATTGCGCCGG GGTCAACGTG TTCCGTGATC CGCTGGAAAT GACCGAAGAA GACTGGAAAC GCTGCTTCGC GATCGACCTC GACGGCGCCT GGTATGGCTG CAAGGCCGTA TTGCCGCAGA TGATCGAGCA GGGCATCGGC AGCATCATCA ACATTGCCTC GACCCATTCC ACGAACATCA TTCCCGGCTG CTTCCCGTAC CCGGTGGCCA AGCATGGCCT GCTCGGCCTG ACCCGCGCGC TGGGCATCGA GTACGCGCCG AAGGGTATTC GGGTCAACGC GATTGCACCG GGCTACATCG AAACCCAGCT CAACGTCGAT TACTGGAACG GTTTCGCCGA CCCGCACGCC GAACGTCAGC GCGCTTTCGA TCTGCACCCA CCGAAACGCA TCGGCCAACC GATCGAAGTG GCAATGACTG CTGTATTCCT GGCCAGTGAT GAAGCGCCGT TCATCAACGC CTCGTGCATC ACTATCGATG GTGGTCGCTC GGTCATGTAC CACGACTGA
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Protein sequence | MAEPLSLPPV PEPPKGERLK NKVVLLTGAA QGIGEAIVAT FASQQAKLVI SDIQAEKVEK VAAHWREQGA DVQAIKADVS RQQDLHAMAK LAIELHGRID VLVNCAGVNV FRDPLEMTEE DWKRCFAIDL DGAWYGCKAV LPQMIEQGIG SIINIASTHS TNIIPGCFPY PVAKHGLLGL TRALGIEYAP KGIRVNAIAP GYIETQLNVD YWNGFADPHA ERQRAFDLHP PKRIGQPIEV AMTAVFLASD EAPFINASCI TIDGGRSVMY HD
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