Gene Pfl01_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4142 
Symbol 
ID3712624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4681364 
End bp4682182 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content61% 
IMG OID 
Productshort chain dehydrogenase 
Protein accessionYP_349870 
Protein GI77460363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.553245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC CTCTGTCCCT GCCACCGGTG CCCGAGCCAC CAAAAGGCGA GCGTCTGAAA 
AACAAGGTTG TGTTGCTGAC CGGCGCCGCC CAAGGCATCG GCGAAGCAAT CGTCGCGACC
TTCGCCTCCC AGCAGGCCAA ACTGGTGATC AGCGATATCC AGGCCGAAAA GGTCGAGAAA
GTCGCCGCCC ACTGGCGCGA GCAGGGCGCC GATGTGCAAG CGATCAAGGC CGACGTATCG
CGTCAGCAGG ATCTGCACGC CATGGCCAAA CTGGCCATCG AACTGCACGG GCGCATCGAC
GTGCTGGTCA ATTGCGCCGG GGTCAACGTG TTCCGTGATC CGCTGGAAAT GACCGAAGAA
GACTGGAAAC GCTGCTTCGC GATCGACCTC GACGGCGCCT GGTATGGCTG CAAGGCCGTA
TTGCCGCAGA TGATCGAGCA GGGCATCGGC AGCATCATCA ACATTGCCTC GACCCATTCC
ACGAACATCA TTCCCGGCTG CTTCCCGTAC CCGGTGGCCA AGCATGGCCT GCTCGGCCTG
ACCCGCGCGC TGGGCATCGA GTACGCGCCG AAGGGTATTC GGGTCAACGC GATTGCACCG
GGCTACATCG AAACCCAGCT CAACGTCGAT TACTGGAACG GTTTCGCCGA CCCGCACGCC
GAACGTCAGC GCGCTTTCGA TCTGCACCCA CCGAAACGCA TCGGCCAACC GATCGAAGTG
GCAATGACTG CTGTATTCCT GGCCAGTGAT GAAGCGCCGT TCATCAACGC CTCGTGCATC
ACTATCGATG GTGGTCGCTC GGTCATGTAC CACGACTGA
 
Protein sequence
MAEPLSLPPV PEPPKGERLK NKVVLLTGAA QGIGEAIVAT FASQQAKLVI SDIQAEKVEK 
VAAHWREQGA DVQAIKADVS RQQDLHAMAK LAIELHGRID VLVNCAGVNV FRDPLEMTEE
DWKRCFAIDL DGAWYGCKAV LPQMIEQGIG SIINIASTHS TNIIPGCFPY PVAKHGLLGL
TRALGIEYAP KGIRVNAIAP GYIETQLNVD YWNGFADPHA ERQRAFDLHP PKRIGQPIEV
AMTAVFLASD EAPFINASCI TIDGGRSVMY HD