| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2974 |
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| Symbol | |
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| ID | 7860085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3316688 |
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| End bp | 3317467 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643867072 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002882981 |
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| Protein GI | 229821455 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAG AACGTTTCGC CGAGCAGGTG GTGCTCATCA CCGGCGCCGC ATCGGGCATC
GGTGCCCACC TCGCCGAACG GTTCGCCACC GAGGGGGCGC GGGTCGCGCT GCTCGACGTC
GACGAGGCCG GTGCGACGGC GATGGCGCAG CGGCTCCCCG ACGCACTCGC GGTCGGGGTC
GACGTCAGCA GTCGAGCGGC GATCCGGGAG GCCCTGGATC TCGTGCGCGA GCGGTGGGGG
AGGCTGGACA TCGTCGTCAA CAACGCCGCG ACGTGCTCGG ACACGCCGTT CGACAGGATC
CCCGACCACG AGTGGGAGAG GGACCTGGCG GTCGACCTGA GCGGGCCGTA CCGGCTGGTC
CAGGAGGCGC TGCCGGACCT GCTGCGGGCG CGCGGCAACG TCCTGAACAT CGTCAGCGTG
AACGGTCTGA CCCACTTCGG CAACGAGAGC TACTCGGTGT CGAAGGCTGG CCTGATGGCG
CTCACGCGGT CGCTCGCGGT CACCTACGGT CCCCAGGGCT TGCGCGCCAA CGCGATCGCT
CCGGCCACGA TCGTGACGCC GATCTGGGAC GACCGGTTGG AGCGTGATCC GCACGTGCTC
GACGCGGCGA CGAAGTGGTA CCCGCTCGGT CGCCTGGGCC AGCCGGACGA CGTCGCGCAC
GCGGCGCTGT TCCTGTGCTC TGCCGAAGCG TCCTGGATCA CCGGCACGAC CCTCGTGGTC
GACGGCGGCC TCCTGGCAGG AAACGCCCTG CTGGCCGACG ACATCATGGC GCAGGGGTGA
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| Protein sequence | MSRERFAEQV VLITGAASGI GAHLAERFAT EGARVALLDV DEAGATAMAQ RLPDALAVGV
DVSSRAAIRE ALDLVRERWG RLDIVVNNAA TCSDTPFDRI PDHEWERDLA VDLSGPYRLV
QEALPDLLRA RGNVLNIVSV NGLTHFGNES YSVSKAGLMA LTRSLAVTYG PQGLRANAIA
PATIVTPIWD DRLERDPHVL DAATKWYPLG RLGQPDDVAH AALFLCSAEA SWITGTTLVV
DGGLLAGNAL LADDIMAQG
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