More than 300 homologs were found in PanDaTox collection
for query gene Strop_1796 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_1796  response regulator receiver  100 
 
 
230 aa  445  1e-124  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  93.91 
 
 
230 aa  413  1e-114  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  65.18 
 
 
227 aa  263  2e-69  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  62.27 
 
 
239 aa  256  2e-67  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  60.62 
 
 
229 aa  249  3e-65  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  58.48 
 
 
225 aa  247  1e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  61.54 
 
 
226 aa  244  6e-64  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  60.36 
 
 
221 aa  243  2e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  59.28 
 
 
226 aa  242  3e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  61.36 
 
 
218 aa  240  1e-62  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  60.81 
 
 
227 aa  238  7e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  56.62 
 
 
224 aa  236  1e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  59.09 
 
 
220 aa  236  2e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  58.45 
 
 
225 aa  236  3e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  60 
 
 
220 aa  235  3e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  62.27 
 
 
220 aa  235  4e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  60.18 
 
 
221 aa  235  5e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  57.08 
 
 
218 aa  234  8e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  58.56 
 
 
226 aa  234  1e-60  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  58.3 
 
 
222 aa  234  1e-60  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  60.62 
 
 
222 aa  233  2e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  56.54 
 
 
239 aa  233  2e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  59.82 
 
 
225 aa  232  4e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  60.27 
 
 
224 aa  232  4e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  57.53 
 
 
221 aa  229  2e-59  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  56.03 
 
 
234 aa  229  3e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  58.41 
 
 
213 aa  228  4e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  58.8 
 
 
226 aa  228  5e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  54.95 
 
 
224 aa  227  1e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  57.4 
 
 
225 aa  226  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  58.82 
 
 
225 aa  226  2e-58  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.14 
 
 
226 aa  224  6e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  57.96 
 
 
223 aa  224  7e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  59.01 
 
 
225 aa  223  1e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  56.05 
 
 
221 aa  224  1e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  59.82 
 
 
221 aa  224  1e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  60 
 
 
220 aa  222  3e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  58.74 
 
 
226 aa  221  7e-57  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  55.91 
 
 
225 aa  221  8e-57  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  56.16 
 
 
215 aa  220  1e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  56.83 
 
 
227 aa  219  2e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  57.83 
 
 
225 aa  219  2e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  54.67 
 
 
230 aa  219  3e-56  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  54.75 
 
 
220 aa  218  4e-56  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  56.62 
 
 
221 aa  218  9e-56  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  55.23 
 
 
239 aa  217  1e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  55.56 
 
 
230 aa  216  2e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  54.75 
 
 
221 aa  216  2e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  50.82 
 
 
250 aa  216  3e-55  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  57.34 
 
 
222 aa  216  3e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  53.98 
 
 
224 aa  216  3e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  54.55 
 
 
234 aa  215  4e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  57.85 
 
 
234 aa  215  4e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  56.42 
 
 
215 aa  215  4e-55  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.19 
 
 
229 aa  215  4e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  53.02 
 
 
231 aa  215  5e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  55.56 
 
 
225 aa  215  5e-55  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  54.3 
 
 
230 aa  215  6e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  55.71 
 
 
226 aa  214  7e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  53.16 
 
 
241 aa  214  7e-55  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  52.91 
 
 
219 aa  214  7e-55  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  55.5 
 
 
218 aa  214  9e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  52.34 
 
 
234 aa  214  1e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  54.5 
 
 
223 aa  214  1e-54  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  53.36 
 
 
228 aa  214  1e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  54.55 
 
 
217 aa  214  1e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  7.94288e-08  unclonable  3.32591e-08 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  54.34 
 
 
218 aa  213  3e-54  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  54.5 
 
 
226 aa  213  3e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  53.74 
 
 
228 aa  212  3e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  53.07 
 
 
228 aa  212  4e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  56.31 
 
 
241 aa  211  6e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  57.34 
 
 
217 aa  211  6e-54  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  52.68 
 
 
219 aa  211  7e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  42.8 
 
 
261 aa  211  7e-54  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  54.94 
 
 
235 aa  211  8e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  57.73 
 
 
220 aa  211  9e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  55.09 
 
 
216 aa  211  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  51.83 
 
 
218 aa  211  1e-53  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  55.45 
 
 
216 aa  211  1e-53  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  53.85 
 
 
221 aa  209  2e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  53.36 
 
 
228 aa  209  2e-53  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  52.97 
 
 
215 aa  209  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  57.41 
 
 
217 aa  208  5e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  53.02 
 
 
217 aa  208  5e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  52.05 
 
 
220 aa  208  5e-53  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.2 
 
 
225 aa  207  8e-53  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  56.95 
 
 
224 aa  207  9e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  53.1 
 
 
232 aa  207  1e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  57.01 
 
 
225 aa  206  2e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  2.66978e-05 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  53.18 
 
 
214 aa  206  2e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  55.36 
 
 
247 aa  206  2e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  54.75 
 
 
228 aa  206  2e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  51.36 
 
 
219 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.67 
 
 
261 aa  206  2e-52  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  54.26 
 
 
226 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  53.3 
 
 
211 aa  206  3e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  51.44 
 
 
249 aa  206  3e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  54.3 
 
 
219 aa  206  3e-52  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  52.59 
 
 
242 aa  206  3e-52  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  1.13212e-10 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  56.44 
 
 
220 aa  206  3e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
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