More than 300 homologs were found in PanDaTox collection
for query gene Shel_05580 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_05580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
512 aa  1041    Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.735856  normal 
 
 
-
 
NC_013204  Elen_1592  transcriptional regulator, LuxR family  36.04 
 
 
518 aa  344  2.9999999999999997e-93  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000355637 
 
 
-
 
NC_013204  Elen_2762  ATP-dependent transcriptional regulator, MalT- like, LuxR family  25.95 
 
 
520 aa  140  7e-32  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_20840  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  25.94 
 
 
524 aa  86.3  0.000000000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.982335  normal 
 
 
-
 
NC_013204  Elen_0500  transcriptional regulator, LuxR family  21.75 
 
 
487 aa  82  0.00000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.472786 
 
 
-
 
NC_013165  Shel_26890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.46 
 
 
515 aa  79.7  0.0000000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0531  transcriptional regulator, LuxR family  28.29 
 
 
529 aa  79  0.0000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.614613  normal  0.848046 
 
 
-
 
NC_013204  Elen_0606  transcriptional regulator, LuxR family  24.32 
 
 
506 aa  78.2  0.0000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.290399 
 
 
-
 
NC_013204  Elen_0496  transcriptional regulator, LuxR family  28.25 
 
 
510 aa  77.8  0.0000000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.484054 
 
 
-
 
NC_013204  Elen_2108  transcriptional regulator, LuxR family  38.14 
 
 
516 aa  73.2  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00926757  normal  0.183235 
 
 
-
 
NC_013204  Elen_0269  transcriptional regulator, LuxR family  35.94 
 
 
499 aa  72.8  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13370  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  30.9 
 
 
537 aa  72  0.00000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.925648  normal 
 
 
-
 
NC_013204  Elen_0506  transcriptional regulator, LuxR family  30.67 
 
 
519 aa  72.4  0.00000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.274884 
 
 
-
 
NC_013204  Elen_1389  transcriptional regulator, LuxR family  30.08 
 
 
478 aa  72.4  0.00000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.544965  normal 
 
 
-
 
NC_013204  Elen_2812  transcriptional regulator, LuxR family  27.72 
 
 
522 aa  70.9  0.00000000005  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.000674561  hitchhiker  0.0000653029 
 
 
-
 
NC_013204  Elen_0171  transcriptional regulator, LuxR family  31.71 
 
 
484 aa  70.9  0.00000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_22730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  24.11 
 
 
502 aa  70.5  0.00000000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0421  transcriptional regulator, LuxR family  45.31 
 
 
552 aa  70.5  0.00000000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.00000000225621 
 
 
-
 
NC_013204  Elen_2824  transcriptional regulator, LuxR family  30.36 
 
 
550 aa  70.5  0.00000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0520  transcriptional regulator, LuxR family  43.28 
 
 
520 aa  69.7  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.1412 
 
 
-
 
NC_013204  Elen_0445  transcriptional regulator, LuxR family  43.08 
 
 
534 aa  69.7  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0406  transcriptional regulator, LuxR family  29.28 
 
 
486 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0269651 
 
 
-
 
NC_013204  Elen_0436  transcriptional regulator, LuxR family  28.57 
 
 
501 aa  68.2  0.0000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13460  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.55 
 
 
472 aa  67.8  0.0000000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2532  transcriptional regulator, LuxR family  40.62 
 
 
500 aa  67  0.0000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0615  transcriptional regulator, LuxR family  45.16 
 
 
462 aa  65.9  0.000000002  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.000000110739  normal 
 
 
-
 
NC_013204  Elen_2688  transcriptional regulator, LuxR family  30.12 
 
 
470 aa  65.9  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0440  transcriptional regulator, LuxR family  27.31 
 
 
526 aa  65.9  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2723  transcriptional regulator, LuxR family  39.68 
 
 
509 aa  65.5  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.397924  normal 
 
 
-
 
NC_013204  Elen_3038  transcriptional regulator, LuxR family  36.62 
 
 
569 aa  65.9  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2779  transcriptional regulator, LuxR family  45.31 
 
 
505 aa  64.7  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.980405 
 
 
-
 
NC_013165  Shel_06810  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.68 
 
 
520 aa  64.7  0.000000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.521043 
 
 
-
 
NC_013204  Elen_2353  transcriptional regulator, LuxR family  25.72 
 
 
516 aa  64.3  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2699  transcriptional regulator, LuxR family  46.77 
 
 
478 aa  64.3  0.000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2929  transcriptional regulator, LuxR family  37.97 
 
 
462 aa  63.9  0.000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_00480  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.97 
 
 
606 aa  63.2  0.00000001  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.00118843  normal 
 
 
-
 
NC_013204  Elen_2932  transcriptional regulator, LuxR family  30.4 
 
 
492 aa  62.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0167  transcriptional regulator, LuxR family  22.28 
 
 
493 aa  62.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.165739  normal 
 
 
-
 
NC_013204  Elen_2258  transcriptional regulator, LuxR family  44.26 
 
 
476 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_03610  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  28.17 
 
 
470 aa  62  0.00000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.166414  normal  0.0491532 
 
 
-
 
NC_013165  Shel_06100  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.62 
 
 
518 aa  62.4  0.00000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.603093 
 
 
-
 
NC_013204  Elen_0597  transcriptional regulator, LuxR family  44.26 
 
 
493 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.882562  normal 
 
 
-
 
NC_013204  Elen_2816  transcriptional regulator, LuxR family  39.39 
 
 
471 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.138304  hitchhiker  0.00338242 
 
 
-
 
NC_013204  Elen_3022  ATP-dependent transcriptional regulator, MalT- like, LuxR family  36.99 
 
 
485 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.709367  normal 
 
 
-
 
NC_013204  Elen_2696  transcriptional regulator, LuxR family  44.44 
 
 
535 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0461  transcriptional regulator, LuxR family  32.31 
 
 
542 aa  62.8  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_23080  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  25.89 
 
 
545 aa  61.6  0.00000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.865531  normal 
 
 
-
 
NC_013165  Shel_16610  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.33 
 
 
491 aa  61.6  0.00000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0119595  normal  0.714327 
 
 
-
 
NC_013165  Shel_12700  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.3 
 
 
488 aa  60.8  0.00000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_24540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33 
 
 
536 aa  60.8  0.00000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0523  transcriptional regulator, LuxR family  31.73 
 
 
511 aa  60.5  0.00000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.500884  normal  0.253762 
 
 
-
 
NC_013204  Elen_0368  transcriptional regulator, LuxR family  37.31 
 
 
516 aa  60.1  0.00000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2795  transcriptional regulator, LuxR family  36.23 
 
 
468 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000289432 
 
 
-
 
NC_013204  Elen_2925  transcriptional regulator, LuxR family  25.55 
 
 
517 aa  60.1  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0133  transcriptional regulator, LuxR family  40.32 
 
 
480 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.384824 
 
 
-
 
NC_013204  Elen_1837  transcriptional regulator, LuxR family  36.36 
 
 
487 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_08650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  28.46 
 
 
508 aa  58.9  0.0000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.197798  normal  0.463051 
 
 
-
 
NC_013204  Elen_1903  transcriptional regulator, LuxR family  44.26 
 
 
196 aa  58.9  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000000231921 
 
 
-
 
NC_013204  Elen_2655  transcriptional regulator, LuxR family  39.68 
 
 
470 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.149331 
 
 
-
 
NC_013204  Elen_2775  transcriptional regulator, LuxR family  36.71 
 
 
481 aa  58.5  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.257993  normal  0.934511 
 
 
-
 
NC_013170  Ccur_02050  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.36 
 
 
541 aa  58.2  0.0000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  22.41 
 
 
493 aa  57.8  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
NC_013204  Elen_0289  transcriptional regulator, LuxR family  27.72 
 
 
498 aa  58.2  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.797409 
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  27.08 
 
 
511 aa  58.2  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_009783  VIBHAR_03364  hypothetical protein  29.17 
 
 
221 aa  57.8  0.0000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013204  Elen_0514  transcriptional regulator, LuxR family  29.68 
 
 
493 aa  57.8  0.0000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.559597 
 
 
-
 
NC_013165  Shel_11580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.48 
 
 
515 aa  57.4  0.0000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.937657  normal 
 
 
-
 
NC_013204  Elen_0985  transcriptional regulator, LuxR family  26.26 
 
 
476 aa  57.4  0.0000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.880452 
 
 
-
 
NC_013204  Elen_0181  transcriptional regulator, LuxR family  40.32 
 
 
600 aa  57  0.0000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.294561  normal 
 
 
-
 
NC_013204  Elen_2114  transcriptional regulator, LuxR family  35.71 
 
 
191 aa  56.6  0.000001  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.00000000451621  normal  0.459179 
 
 
-
 
NC_013204  Elen_0184  transcriptional regulator, LuxR family  40.98 
 
 
507 aa  56.6  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.131926  normal 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  49.02 
 
 
216 aa  56.2  0.000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0971  transcriptional regulator, LuxR family  34.33 
 
 
313 aa  56.6  0.000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.16732  hitchhiker  0.00115778 
 
 
-
 
NC_013204  Elen_0473  transcriptional regulator, LuxR family  24.12 
 
 
488 aa  55.5  0.000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.815594  normal 
 
 
-
 
NC_009972  Haur_3342  LuxR family transcriptional regulator  46.3 
 
 
461 aa  55.8  0.000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.7323  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  48.98 
 
 
253 aa  55.5  0.000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1008  transcriptional regulator, LuxR family  30.14 
 
 
495 aa  55.8  0.000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.831923  normal  0.0679507 
 
 
-
 
NC_013170  Ccur_12490  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.19 
 
 
560 aa  55.8  0.000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  38.37 
 
 
209 aa  55.8  0.000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_013739  Cwoe_1523  ATP-dependent transcriptional regulator, MalT- like, LuxR family  50 
 
 
873 aa  55.8  0.000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  51.02 
 
 
236 aa  55.5  0.000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_012857  Rpic12D_4118  transcriptional regulator, LuxR family  41.94 
 
 
213 aa  55.1  0.000003  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0992  transcriptional regulator, LuxR family  36.36 
 
 
493 aa  55.1  0.000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3498  transcriptional regulator, LuxR family  41.43 
 
 
73 aa  55.1  0.000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1181  response regulator, positive activator of uhpT transcription  30.77 
 
 
318 aa  54.7  0.000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.0000000041551  decreased coverage  0.008996 
 
 
-
 
NC_010678  Rpic_4005  transcriptional regulator, LuxR family  41.94 
 
 
213 aa  55.1  0.000003  Ralstonia pickettii 12J  Bacteria  normal  0.469867  normal 
 
 
-
 
NC_013204  Elen_0072  transcriptional regulator, LuxR family  35.59 
 
 
477 aa  54.7  0.000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.323936  normal 
 
 
-
 
NC_013165  Shel_02650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  26.75 
 
 
505 aa  54.7  0.000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13550  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  26.83 
 
 
506 aa  54.7  0.000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0630  transcriptional regulator, LuxR family  38.33 
 
 
528 aa  54.7  0.000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.07 
 
 
464 aa  54.3  0.000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  49.02 
 
 
212 aa  53.9  0.000006  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_013170  Ccur_10150  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  22.66 
 
 
483 aa  53.9  0.000007  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.906615  hitchhiker  0.00359447 
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  51.11 
 
 
213 aa  53.9  0.000008  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0939  two component transcriptional regulator, LuxR family  50 
 
 
247 aa  53.5  0.000009  Variovorax paradoxus S110  Bacteria  normal  0.224899  n/a   
 
 
-
 
NC_013037  Dfer_0724  two component transcriptional regulator, LuxR family  29.73 
 
 
210 aa  53.5  0.000009  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.836709 
 
 
-
 
NC_007908  Rfer_3373  two component LuxR family transcriptional regulator  50 
 
 
262 aa  52.8  0.00001  Rhodoferax ferrireducens T118  Bacteria  normal  0.492418  n/a   
 
 
-
 
NC_008541  Arth_1234  LuxR family transcriptional regulator  45.76 
 
 
856 aa  53.1  0.00001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0123  transcriptional regulator, LuxR family  42.59 
 
 
492 aa  53.1  0.00001  Eggerthella lenta DSM 2243  Bacteria  normal  0.891774  normal 
 
 
-
 
NC_008825  Mpe_A2412  hypothetical protein  40.62 
 
 
377 aa  53.1  0.00001  Methylibium petroleiphilum PM1  Bacteria  normal  0.390021  normal 
 
 
-
 
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