Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4118 |
Symbol | |
ID | 8021806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 719114 |
End bp | 719755 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644832899 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_002984039 |
Protein GI | 241665680 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGTC TTTCTGTCAC GTCACCTCAT GCCTCGGCAA CCGTGCTGCG CCAATGCTAC GTAGCGGCGT GCGCGGGCGA TGCCGTGGGC GTGATGAACG TGCTGCGCGA TGCGTGCGGC GCGGACCATG CAGCGGCCAT GATCCGGTGG CGCGTCGATG GGAGGTGGCA CTGGGCGGCA TCGCGCGGCG CACGCTCGGC CGACGTGCTG CTGCATGCGG TACGCGGTGA CGGCGTCGAC GCGTGGCCGA TGGCCGATGC GGAAGTGCGC GGGGCGGTGT GGCTCGATTA CCGCAAGGCG GGCGTGCCGC AACCCATGCA GCATGGTGCG GCGCCACAAG CGTTGCTGCC GCACTTTGCG CAAGCACTGC CGTTGTGCTG GCGACGCGTT GCGGCGCGCG CGGGCATTTC GCCTGCGCAG CCGGCCAGCC TCTGGCTGAC CGACGCATTC CACCTGACGC GCCGCGAAGC CGATGTTGCC GATCTGCTCG CAAGCGGCTC CGACCCAGCC TGCATTGCCC GCACGCTAGG CATTTCACTC GACACGGTGC GCACGCACCT CAAACACGTC TACCGCAAGA CCAACACGCA CAGCCAGTGC GACGTGGTGC GGCTGATGCT GGCGCTGTCT GCGCGCCGGT AG
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Protein sequence | MPRLSVTSPH ASATVLRQCY VAACAGDAVG VMNVLRDACG ADHAAAMIRW RVDGRWHWAA SRGARSADVL LHAVRGDGVD AWPMADAEVR GAVWLDYRKA GVPQPMQHGA APQALLPHFA QALPLCWRRV AARAGISPAQ PASLWLTDAF HLTRREADVA DLLASGSDPA CIARTLGISL DTVRTHLKHV YRKTNTHSQC DVVRLMLALS ARR
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