| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0971 |
|---|
| Symbol | |
|---|
| ID | 8415261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1178706 |
|---|
| End bp | 1179647 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645023935 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003181332 |
|---|
| Protein GI | 257790726 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.16732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00115778 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGTCTACC TACTGTTTTT CTACGATATG GCGATGACGA TGGCGAACAC GGCTCTCTGC
GTCGCGTTCG CCGTTCTGTT CGTGCGGCGC AAGAACGCCC TTCATCTGTG GCTCGCCGTC
CTGTTCGGCT TGAGCACGGC CGACATCATG CTCATGTACC TGTTCGACTT CGTGCCCGAG
TTCCAGTCGG TGTTCAGCGC CGCTCCCGGG GCGTCTCCGT TCGTCTACGG GTACCTCCAT
CTCGGCATCC TGCTGACGTT CCGGTTCATC GCGGGGTTCA TCTTCGACCG GCCGCCGGCG
CTGCGCGAAG GGGCGCTGTG GATCCTGTGC TGCACGTACC TGGCGGTGGC GGGCTCGCTA
GCGGAGGCGA CGGTGGAGGA GTTCGCCGAG AACCTGTGCA TCGGCGTGCT GCAGCTCTAC
ATCATGGGCA TCGGCGTGAA GGGGCTGCGC GACGGCCGCG GCGCGAACGG GGTGCTCGGC
GCGCGGGCGG TCGCGGCGCT GGTCGCGTCG TTCGCGTTCT GCTCGGTGGG CTATCTTGCC
TGGTCGATCG GGTCGTTCGC GGCGGGGTGG GGAAGCCCGC GCAACGTGTT CGTGGAGCTG
TCGGGCGGCG TCAACCTCGT GTTCGCCTGC CTCTACCTGC AGGCGTACGT CCGCAAGCGC
CGCGAGGCGT CGGCCCCGAC GGCGGTGCCC TTCGTCGCGA AGCGCTACGA CCTCACCAAG
CGCGAGGAGG AGATGCTGGA AATGCTCGCC GACGGTATGA GCAACCAGCA GATCAGCTCG
CAGGCGTTCA TCTCGGTGGG CACGGTGAAG ACGCACGCGC ACAACATCTA CGCGAAGCTC
GGCATCAAGG GCCGCGCCGA TCTGGCCGAG TTCCTCGAGC GCGAGCTGAC CGACTCCCTC
GACCATCGCG TCGACGCGCG TTCCGCGCGA ACGGGCGGGT AA
|
|---|
| Protein sequence | MVYLLFFYDM AMTMANTALC VAFAVLFVRR KNALHLWLAV LFGLSTADIM LMYLFDFVPE
FQSVFSAAPG ASPFVYGYLH LGILLTFRFI AGFIFDRPPA LREGALWILC CTYLAVAGSL
AEATVEEFAE NLCIGVLQLY IMGIGVKGLR DGRGANGVLG ARAVAALVAS FAFCSVGYLA
WSIGSFAAGW GSPRNVFVEL SGGVNLVFAC LYLQAYVRKR REASAPTAVP FVAKRYDLTK
REEEMLEMLA DGMSNQQISS QAFISVGTVK THAHNIYAKL GIKGRADLAE FLERELTDSL
DHRVDARSAR TGG
|
|---|
| |