Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3342 |
Symbol | |
ID | 5735212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4213424 |
End bp | 4214809 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641280489 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001546106 |
Protein GI | 159899859 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.7323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATC AATCACCACT CAGCGAGCGT GAAATCGAGG TCTTGCGCCA GCTCGCGCTG GGGGCAAGCA ATAACGAAAT TGCCAATACG CTGGTCATCA GCCCCAACAC AGTCAAAGTG CATATTCGCA ATATCTACGC TAAGCTGGGG GTATTATCAC GGGCTGAGGC GACGCTTGAG GCTGTGCGGC GCGGCCTGAT CGAGGTTTTG AATACTCCAA ATTCAGTGCC CGAGCCTGAG CGCATTCCTG AGAGCGAGCC GCTCGTCAGT ATTCCAATTG ATGAGCCAAT CGCGCCTGAA CCAATGCAGA TACCTAGCAC GACTCAGCCG ATCACAACTC CAGCACCCGA TCCGATTACC CCAGTGATCA CCCAACCAAC CAATCAAATT ACAATTCCCC GAGCCTATGC ATTGGCGATT TTGGGTGTGC TATTTGGGCT GATTGTGGCA GTGGTGGCAA TTGGCTGGTT TGTGGTACGC GGCAACATCA CGCCAACCAC CCAGCCTGCG ACAACGCTTG TGAGCAATGT TTGGCAACCA CTGACCGCAC TGCCCGAGCC AACCTACCAA CATGCCGGGG TTTTTCTAGC CGATAGTTTG ATTGTGATTG GCGGCAACAC TGATACTGGC GTGGTGGCGC ATACCCGTCA ATTGAATTTG GCAACCGGGG CGTGGCGTGA ACTGGCTAGC AAGCCAACGG CGGTGGCCTC TAGCGGCGCA GTGCAGATTG CTGGCCAAAT TTATGTAGCA GGTGGCCGCG ATAAAAATGG TGCGGCTAGT AATATTTTAG AGATTTTTGA CCTAGCCCAA AATCGTTGGC AAACTGGCCC AGCCATGCCT GCCCCACGCG CCAATGCCAT GATTGCCGCT ATCGATGGCA AAGTTTATGT GTTTGGCGGC GAGAATGAGG GGATCATCGC CGATACCAGC TTTATTTATA GCCCCGATAC CCAAAGCTGG AGCCAAGGCC CGGCCATGCC ATTGGCCTTA CGTGATGCAG CCATTGCCCA AAGTGGCGGC GATGTTGTAT TGATCGGCGG CCAAACCTCA ACTGGCCCCA GCCTTGGAAC CTGGCGTTTA CAAACTGGCA CATGGCAAAA AATAACCGAT CTGCCAGCCC CACGAGTTGA CGCTGGCGCG GTTTATATCA CCAATCAGAT CTATTTGGTG GGTGGAGCTG AGGGCGACCA AGCTATTTTG GTGTTGCAAA ACAATATCTG GAATGCAACC GATTTGCGCA CCGGCCATGC AATCAGCGAA CACCTCGTGC TTTCAAATGC TCGGGATATT TATAGCATTG GTGGTTGGAA CGGCACGAAT GCGCTCGCTG AAACCCGTAG TTGGACTCCG ATTACCAATA TCTTCTTGCC AAGTGTGGGC AAATAG
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Protein sequence | MSDQSPLSER EIEVLRQLAL GASNNEIANT LVISPNTVKV HIRNIYAKLG VLSRAEATLE AVRRGLIEVL NTPNSVPEPE RIPESEPLVS IPIDEPIAPE PMQIPSTTQP ITTPAPDPIT PVITQPTNQI TIPRAYALAI LGVLFGLIVA VVAIGWFVVR GNITPTTQPA TTLVSNVWQP LTALPEPTYQ HAGVFLADSL IVIGGNTDTG VVAHTRQLNL ATGAWRELAS KPTAVASSGA VQIAGQIYVA GGRDKNGAAS NILEIFDLAQ NRWQTGPAMP APRANAMIAA IDGKVYVFGG ENEGIIADTS FIYSPDTQSW SQGPAMPLAL RDAAIAQSGG DVVLIGGQTS TGPSLGTWRL QTGTWQKITD LPAPRVDAGA VYITNQIYLV GGAEGDQAIL VLQNNIWNAT DLRTGHAISE HLVLSNARDI YSIGGWNGTN ALAETRSWTP ITNIFLPSVG K
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