More than 300 homologs were found in PanDaTox collection
for query gene Rxyl_0589 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008148  Rxyl_0589  two component transcriptional regulator  100 
 
 		 229 aa  454  1e-127  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.588929  n/a   
 
 
-
 
NC_013526  Tter_2867  two component transcriptional regulator, winged helix family  43.97 
 
 		 233 aa  165  6.9999999999999995e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  42.98 
 
 		 239 aa  162  4.0000000000000004e-39  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  42.98 
 
 		 239 aa  162  4.0000000000000004e-39  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  43.89 
 
 		 237 aa  159  3e-38  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  41.44 
 
 		 231 aa  157  2e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal  1 
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  37.02 
 
 		 239 aa  153  2e-36  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  40.35 
 
 		 231 aa  151  7e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  hitchhiker  0.000343135 
 
 
-
 
NC_010003  Pmob_0875  two component transcriptional regulator  38.66 
 
 		 242 aa  150  1e-35  Petrotoga mobilis SJ95  Bacteria  decreased coverage  0.000486966  n/a   
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  42.99 
 
 		 228 aa  150  2e-35  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1832  two component transcriptional regulator  40.35 
 
 		 245 aa  150  2e-35  Acidothermus cellulolyticus 11B  Bacteria  normal  0.366424  normal  0.561636 
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  37.56 
 
 		 230 aa  148  8e-35  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  37.87 
 
 		 239 aa  147  1.0000000000000001e-34  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_011145  AnaeK_3000  two component transcriptional regulator, winged helix family  41.7 
 
 		 234 aa  147  1.0000000000000001e-34  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  37.39 
 
 		 235 aa  147  1.0000000000000001e-34  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_011891  A2cp1_3106  two component transcriptional regulator, winged helix family  41.7 
 
 		 234 aa  146  2.0000000000000003e-34  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_2914  two component transcriptional regulator  41.78 
 
 		 245 aa  146  3e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.634998  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  37.89 
 
 		 232 aa  145  4.0000000000000006e-34  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1916  two component transcriptional regulator  38.39 
 
 		 228 aa  145  4.0000000000000006e-34  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.400732  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  38.16 
 
 		 235 aa  145  4.0000000000000006e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  37.77 
 
 		 237 aa  145  6e-34  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  38.46 
 
 		 235 aa  145  7.0000000000000006e-34  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  38.46 
 
 		 235 aa  145  7.0000000000000006e-34  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  38.46 
 
 		 235 aa  145  7.0000000000000006e-34  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  39.47 
 
 		 232 aa  144  8.000000000000001e-34  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  38.46 
 
 		 235 aa  144  9e-34  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  38.46 
 
 		 235 aa  144  9e-34  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  38.46 
 
 		 235 aa  144  9e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  38.46 
 
 		 235 aa  144  9e-34  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  38.46 
 
 		 235 aa  144  9e-34  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  38.46 
 
 		 235 aa  144  9e-34  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  38.46 
 
 		 235 aa  144  9e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  36.16 
 
 		 230 aa  144  2e-33  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_1878  two component transcriptional regulator  37.93 
 
 		 242 aa  144  2e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.559477 
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  39.73 
 
 		 231 aa  144  2e-33  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  40.53 
 
 		 230 aa  143  2e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.683455 
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  37.61 
 
 		 234 aa  143  2e-33  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  37.61 
 
 		 234 aa  143  2e-33  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  41.41 
 
 		 240 aa  143  3e-33  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal  1 
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  38.3 
 
 		 235 aa  143  3e-33  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  42.17 
 
 		 230 aa  142  4e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  38.03 
 
 		 235 aa  142  4e-33  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_009767  Rcas_0960  two component transcriptional regulator  40.35 
 
 		 236 aa  142  5e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0214647 
 
 
-
 
NC_007335  PMN2A_0436  two component transcriptional regulator  36.09 
 
 		 245 aa  142  5e-33  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.18923  n/a   
 
 
-
 
NC_011899  Hore_04710  two component transcriptional regulator, winged helix family  36.05 
 
 		 237 aa  142  5e-33  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  37.34 
 
 		 234 aa  142  6e-33  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_004116  SAG0712  DNA-binding response regulator  31.88 
 
 		 234 aa  141  8e-33  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  36.16 
 
 		 232 aa  141  8e-33  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  37.56 
 
 		 229 aa  141  8e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  39.91 
 
 		 231 aa  141  8e-33  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  38.49 
 
 		 236 aa  140  9.999999999999999e-33  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_009436  Ent638_1374  two component transcriptional regulator  36.56 
 
 		 238 aa  140  9.999999999999999e-33  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  37.56 
 
 		 229 aa  141  9.999999999999999e-33  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  37.1 
 
 		 226 aa  141  9.999999999999999e-33  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_010001  Cphy_1954  two component transcriptional regulator  37.44 
 
 		 229 aa  140  9.999999999999999e-33  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000155813  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  37.66 
 
 		 235 aa  140  1.9999999999999998e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006368  lpp1393  transcriptional regulatory protein CpxR  36.32 
 
 		 226 aa  140  1.9999999999999998e-32  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  38.98 
 
 		 237 aa  140  1.9999999999999998e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008819  NATL1_11471  two-component response regulator, phosphate  36.09 
 
 		 245 aa  140  1.9999999999999998e-32  Prochlorococcus marinus str. NATL1A  Bacteria  normal  1  normal  0.0202491 
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  39.29 
 
 		 261 aa  140  1.9999999999999998e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_006369  lpl1603  transcriptional regulatory protein CpxR  36.32 
 
 		 226 aa  139  3e-32  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_0581  winged helix family two component transcriptional regulator  37.72 
 
 		 242 aa  139  3e-32  'Nostoc azollae' 0708  Bacteria  normal  0.296955  n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  39.61 
 
 		 226 aa  139  3e-32  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_009664  Krad_3815  two component transcriptional regulator, winged helix family  41.33 
 
 		 225 aa  139  3e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0278114  normal  0.0118387 
 
 
-
 
NC_013216  Dtox_2729  two component transcriptional regulator, winged helix family  36.77 
 
 		 228 aa  139  3.9999999999999997e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.981161  normal  0.424997 
 
 
-
 
NC_009253  Dred_1903  two component transcriptional regulator  37 
 
 		 230 aa  139  4.999999999999999e-32  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009976  P9211_01481  two-component response regulator  37.55 
 
 		 248 aa  138  6e-32  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  36.82 
 
 		 239 aa  138  7e-32  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.000130788 
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  36.82 
 
 		 239 aa  138  7e-32  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  38.33 
 
 		 227 aa  138  7e-32  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  37.87 
 
 		 236 aa  138  7.999999999999999e-32  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  36.82 
 
 		 239 aa  138  7.999999999999999e-32  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  36.82 
 
 		 239 aa  138  7.999999999999999e-32  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  36.82 
 
 		 239 aa  138  7.999999999999999e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  36.82 
 
 		 239 aa  138  7.999999999999999e-32  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  36.82 
 
 		 239 aa  138  7.999999999999999e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  36.82 
 
 		 239 aa  138  7.999999999999999e-32  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  36.82 
 
 		 239 aa  138  8.999999999999999e-32  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_3485  two component transcriptional regulator  40.35 
 
 		 236 aa  138  8.999999999999999e-32  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  36.65 
 
 		 228 aa  137  1e-31  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  39.04 
 
 		 230 aa  137  1e-31  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.19 
 
 		 231 aa  137  1e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_007516  Syncc9605_2384  two component transcriptional regulator  38.16 
 
 		 259 aa  137  1e-31  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  36.86 
 
 		 239 aa  137  1e-31  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  40.09 
 
 		 236 aa  137  1e-31  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal  1 
 
 
-
 
NC_013131  Caci_0793  two component transcriptional regulator, winged helix family  39.56 
 
 		 225 aa  137  1e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  37.05 
 
 		 234 aa  137  2e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_008820  P9303_26531  two-component response regulator  37.13 
 
 		 248 aa  137  2e-31  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  1 
 
 
-
 
NC_011831  Cagg_0393  two component transcriptional regulator, winged helix family  40.71 
 
 		 227 aa  137  2e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.202895 
 
 
-
 
NC_011830  Dhaf_2193  two component transcriptional regulator, winged helix family  35.75 
 
 		 237 aa  137  2e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0620475  n/a   
 
 
-
 
NC_007516  Syncc9605_1618  two component transcriptional regulator  36.84 
 
 		 254 aa  136  2e-31  Synechococcus sp. CC9605  Bacteria  normal  1  normal  0.218753 
 
 
-
 
NC_012803  Mlut_14770  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.56 
 
 		 226 aa  137  2e-31  Micrococcus luteus NCTC 2665  Bacteria  normal  0.383411  n/a   
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  39.65 
 
 		 236 aa  136  2e-31  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal  1 
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  37.72 
 
 		 237 aa  137  2e-31  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_0783  two component transcriptional regulator  36.56 
 
 		 231 aa  137  2e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B0590  DNA-binding response regulator  34.36 
 
 		 230 aa  137  2e-31  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  39.56 
 
 		 236 aa  137  2e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  unclonable  0.0000000182155 
 
 
-
 
NC_014248  Aazo_2741  winged helix family two component transcriptional regulator  37.83 
 
 		 250 aa  137  2e-31  'Nostoc azollae' 0708  Bacteria  normal  0.0957275  n/a   
 
 
-
 
NC_013169  Ksed_08590  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  38.05 
 
 		 239 aa  136  3.0000000000000003e-31  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  0.857083 
 
 
-
 
NC_008817  P9515_01621  two-component response regulator  37.28 
 
 		 248 aa  136  3.0000000000000003e-31  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.367767  n/a   
 
 
-
 
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