Gene Dtox_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2729 
Symbol 
ID8429715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2883320 
End bp2884006 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content46% 
IMG OID645035003 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003192130 
Protein GI258515908 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.981161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.424997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA TCTTGATTAT TGAAGACGAT CTTCATATTG CCGAACTGGA GAGGGACTAT 
CTTCAGTTGA ACGGGTTTAA GGCCGATATC GTCCAGGATG GGGTTCAGGG ACTGAAAAAG
GCTCTCCCGG GCAATTATGA CGTCATTATT GTGGATCTGA TGTTGCCCGG CAAGGACGGC
TATGAAATCA TCAGAGAAAT AAGGGAAAAA CTAGATGTTC CTGTAGTGGT GGTTTCGGCC
AAAGATGAGG ACGTGAACAA AATCAGGGGA CTGGAGTATG GAGCCGACGA TTATCTGACC
AAACCCTTCA GCCCAGGCGA ACTGGTGGCC AGGATCAAGT CCCATATCAG AAGATATGAG
CGGCTTAAGG GCAACCATGT TCCCTCTGAA GTTATCATTC ACAGGGGGTT GGAAATCAAT
ACGGCATCTC ACAGGGTGTA CCTCAATGGC CAGCAAGTTC AGATGACCAC CAGGGAATAT
GAATTGTTGT TGTTTCTTGC CTCCAACCCT GGCATTGTTT TTTCAAAAGA GCATATTCTT
GTAAGCATAT GGGGCGATGA TTACTTTGGG GATACGGCAA CCGTGGCTGT ACATATCCAA
AAAATAAGGA AAAAGATAGA AAAGGATCCG TCTAACCCAG AGTTTATCGA AACTCTCTGG
GGGACGGGCT ACCGCTTTAA TAAGTAA
 
Protein sequence
MKRILIIEDD LHIAELERDY LQLNGFKADI VQDGVQGLKK ALPGNYDVII VDLMLPGKDG 
YEIIREIREK LDVPVVVVSA KDEDVNKIRG LEYGADDYLT KPFSPGELVA RIKSHIRRYE
RLKGNHVPSE VIIHRGLEIN TASHRVYLNG QQVQMTTREY ELLLFLASNP GIVFSKEHIL
VSIWGDDYFG DTATVAVHIQ KIRKKIEKDP SNPEFIETLW GTGYRFNK