Gene lpp1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp1393 
SymbolcpxR 
ID3118718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand- 
Start bp1550952 
End bp1551632 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content39% 
IMG OID637580088 
Producttranscriptional regulatory protein CpxR 
Protein accessionYP_123717 
Protein GI54297348 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCT CTATTCTCAT TATTGATGAT GACACAGAAC TAACAGATTT ATTAACTCAA 
TATTTAGAGC CAGAAGGCTT TAATGTAGTA TGCGTTCATG ATGGAGAAAA TGGCGTTAAA 
AAAGCTTTAA ATCAGGTATT TGATGCCATT ATACTCGACG TCATGCTGCC TAAGCTTAAT 
GGTTTTGAAG TATTAAAAGC AATAAGAGAG CATTTGGAAA CACCTGTATT GATGTTAACT 
GCTCGTGGTG ATGATATCGA TCGCATTGTT GGGTTAGAAA TTGGTGCAGA TGATTACTTA 
CCTAAACCCT GTAATCCAAG AGAGTTAGTT GCACGTCTGC GTGCTATTTT AAGACGCACT 
CAAAAAATCC CAACTCCCAA ACCAATTATT GAACAACATA ATATCATTGT GGATTGCTCC 
AAACGCCACG TGACTATGGG AGGAAAATTC CTTGAATTAA CCAATGCGGA ATTTAATATT 
TTGGAGATGT TAATCAAATC ACCAGGACAA GCATTTTCCA AAGAGGAACT CACCGAATAT 
GCTCTGGGAA GAAAATACAC TGCTTATGAC CGCAGTATCG ATGTTCACAT CAGCAATTTG 
CGAAATAAAT TAGGCGATAA TCCCCAGGGG GAACCTTTAG TCAAAACTGT CCGCGGGTTT 
GGGTACATGT TTAATGCGTA G
 
Protein sequence
MSSSILIIDD DTELTDLLTQ YLEPEGFNVV CVHDGENGVK KALNQVFDAI ILDVMLPKLN 
GFEVLKAIRE HLETPVLMLT ARGDDIDRIV GLEIGADDYL PKPCNPRELV ARLRAILRRT 
QKIPTPKPII EQHNIIVDCS KRHVTMGGKF LELTNAEFNI LEMLIKSPGQ AFSKEELTEY 
ALGRKYTAYD RSIDVHISNL RNKLGDNPQG EPLVKTVRGF GYMFNA