More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_3590 on replicon NC_009429
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009429  Rsph17025_3590  glutathionylspermidine synthase  100 
 
 
423 aa  838    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0189919  normal  0.320323 
 
 
-
 
NC_008044  TM1040_0580  hypothetical protein  36.04 
 
 
407 aa  236  4e-61  Ruegeria sp. TM1040  Bacteria  normal  0.376144  hitchhiker  0.000000596414 
 
 
-
 
NC_014165  Tbis_0064  PAS sensor protein  41.43 
 
 
456 aa  147  2.0000000000000003e-34  Thermobispora bispora DSM 43833  Bacteria  normal  0.106866  normal 
 
 
-
 
NC_013510  Tcur_0130  PAS sensor protein  42.31 
 
 
451 aa  147  3e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0725  putative methyl-accepting chemotaxis sensory transducer  33.33 
 
 
495 aa  136  6.0000000000000005e-31  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1312  putative PAS/PAC sensor protein  39.38 
 
 
174 aa  112  1.0000000000000001e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.723682  normal  0.171791 
 
 
-
 
NC_007958  RPD_3908  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
174 aa  110  4.0000000000000004e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4792  putative PAS/PAC sensor protein  39.38 
 
 
174 aa  109  1e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0368  PAS sensor protein  35.44 
 
 
168 aa  107  4e-22  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.580475  n/a   
 
 
-
 
NC_007643  Rru_A2378  transcriptional regulator  38.46 
 
 
174 aa  107  6e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3403  PAS sensor protein  37.58 
 
 
189 aa  105  1e-21  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.263742  normal  0.531721 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  43.2 
 
 
522 aa  104  2e-21  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.2 
 
 
522 aa  104  3e-21  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.79 
 
 
556 aa  104  3e-21  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  42.4 
 
 
533 aa  103  5e-21  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0659  putative PAS/PAC sensor protein  44.27 
 
 
164 aa  103  8e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  44.35 
 
 
520 aa  102  1e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.35 
 
 
522 aa  101  2e-20  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.35 
 
 
522 aa  101  2e-20  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.35 
 
 
522 aa  101  2e-20  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  41.13 
 
 
515 aa  101  3e-20  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.69 
 
 
526 aa  100  4e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.1 
 
 
516 aa  100  4e-20  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_008781  Pnap_2812  putative PAS/PAC sensor protein  42.64 
 
 
166 aa  100  4e-20  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.494423  decreased coverage  0.000000324615 
 
 
-
 
NC_007778  RPB_1413  putative PAS/PAC sensor protein  39.05 
 
 
185 aa  100  4e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.026067  normal 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  41.6 
 
 
522 aa  100  5e-20  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  41.73 
 
 
517 aa  100  5e-20  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009802  CCC13826_1233  methyl-accepting chemotaxis protein  37.41 
 
 
166 aa  100  5e-20  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3464  transcriptional regulator  37.8 
 
 
174 aa  100  6e-20  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2022  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.33 
 
 
748 aa  100  6e-20  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  32.33 
 
 
549 aa  99  1e-19  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.22 
 
 
514 aa  99.4  1e-19  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4683  putative PAS/PAC sensor protein  43.08 
 
 
173 aa  99.4  1e-19  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.19 
 
 
523 aa  99.4  1e-19  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
522 aa  99.4  1e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1962  methyl-accepting chemotaxis protein  36.3 
 
 
166 aa  99.4  1e-19  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1223  signal-transduction sensor protein  46.32 
 
 
189 aa  97.8  3e-19  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.658782  n/a   
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.55 
 
 
550 aa  97.8  3e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  41.54 
 
 
565 aa  98.2  3e-19  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.41 
 
 
514 aa  97.8  3e-19  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.77 
 
 
524 aa  97.4  4e-19  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.77 
 
 
524 aa  97.4  4e-19  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1393  methyl-accepting chemotaxis sensory transducer  38.12 
 
 
182 aa  97.1  5e-19  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.959449 
 
 
-
 
NC_007908  Rfer_0120  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.91 
 
 
519 aa  97.1  6e-19  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  40.5 
 
 
518 aa  97.1  6e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_007347  Reut_A2452  PAS  40.16 
 
 
518 aa  96.7  7e-19  Ralstonia eutropha JMP134  Bacteria  normal  0.952184  n/a   
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.77 
 
 
566 aa  96.3  8e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  39.1 
 
 
521 aa  95.9  1e-18  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  40 
 
 
524 aa  96.3  1e-18  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.54 
 
 
1170 aa  96.3  1e-18  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1323  methyl-accepting chemotaxis protein  37.82 
 
 
165 aa  95.1  2e-18  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1204  methyl-accepting chemotaxis protein  37.82 
 
 
165 aa  95.1  2e-18  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1071  putative PAS/PAC sensor protein  36.25 
 
 
178 aa  95.1  2e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.1 
 
 
521 aa  95.1  2e-18  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_010678  Rpic_3951  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.94 
 
 
529 aa  94.4  3e-18  Ralstonia pickettii 12J  Bacteria  normal  0.226395  normal 
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  40.32 
 
 
521 aa  94.7  3e-18  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_009441  Fjoh_2525  putative PAS/PAC sensor protein  46.74 
 
 
208 aa  94.7  3e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0659487  n/a   
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  39.42 
 
 
623 aa  94.4  3e-18  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4064  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.94 
 
 
529 aa  94.4  3e-18  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.77 
 
 
524 aa  94.7  3e-18  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4662  putative PAS/PAC sensor protein  38.82 
 
 
168 aa  94.7  3e-18  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.193201 
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  39.42 
 
 
580 aa  94.4  4e-18  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  39.42 
 
 
580 aa  94.4  4e-18  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3406  PAS  42.28 
 
 
521 aa  94.4  4e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  39.42 
 
 
580 aa  94.4  4e-18  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  39.42 
 
 
583 aa  94.4  4e-18  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  39.42 
 
 
580 aa  94.4  4e-18  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  39.42 
 
 
669 aa  94  5e-18  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  36.13 
 
 
522 aa  93.6  5e-18  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS03711  methyl-accepting chemotaxis transducer transmembrane protein  42.42 
 
 
529 aa  93.6  6e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  0.784638  normal  0.611118 
 
 
-
 
NC_011004  Rpal_4975  putative PAS/PAC sensor protein  35 
 
 
178 aa  93.6  6e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.161434  n/a   
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  39.52 
 
 
523 aa  93.6  6e-18  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.78 
 
 
716 aa  93.6  6e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  40.94 
 
 
521 aa  93.6  7e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  39.02 
 
 
532 aa  92.4  1e-17  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  40.16 
 
 
527 aa  92.8  1e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.84 
 
 
521 aa  92.4  1e-17  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  28.72 
 
 
519 aa  92.4  1e-17  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_007298  Daro_4009  PAS  37.61 
 
 
172 aa  92.4  1e-17  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.71 
 
 
520 aa  92.8  1e-17  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  39.53 
 
 
583 aa  92.8  1e-17  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.58 
 
 
598 aa  92.4  1e-17  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  36.23 
 
 
538 aa  91.7  2e-17  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000496  methyl-accepting chemotaxis protein  39.71 
 
 
520 aa  92  2e-17  Vibrio sp. Ex25  Bacteria  normal  0.0232366  n/a   
 
 
-
 
NC_007298  Daro_0674  PAS  42.48 
 
 
544 aa  91.7  2e-17  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
521 aa  92  2e-17  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.88 
 
 
524 aa  92  2e-17  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.59 
 
 
566 aa  92  2e-17  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.31 
 
 
575 aa  92  2e-17  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_007575  Suden_1652  putative PAS/PAC sensor protein  40.17 
 
 
127 aa  91.7  2e-17  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.129926  n/a   
 
 
-
 
NC_010524  Lcho_1520  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.46 
 
 
543 aa  92  2e-17  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.112151 
 
 
-
 
NC_007650  BTH_II2125  methyl-accepting chemotaxis protein  38.93 
 
 
514 aa  91.7  2e-17  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  44.04 
 
 
511 aa  91.7  3e-17  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  27.42 
 
 
524 aa  91.3  3e-17  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010730  SYO3AOP1_0920  putative PAS/PAC sensor protein  35.44 
 
 
170 aa  91.3  3e-17  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2372  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.69 
 
 
579 aa  91.3  3e-17  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  34.42 
 
 
522 aa  90.5  5e-17  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_009784  VIBHAR_06258  hypothetical protein  41.32 
 
 
520 aa  90.1  6e-17  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  34.42 
 
 
522 aa  90.1  6e-17  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009707  JJD26997_0540  methyl-accepting chemotaxis protein  36.67 
 
 
166 aa  90.1  6e-17  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
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