More than 300 homologs were found in PanDaTox collection
for query gene Tbis_0064 on replicon NC_014165
Organism: Thermobispora bispora DSM 43833



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014165  Tbis_0064  PAS sensor protein  100 
 
 
456 aa  912    Thermobispora bispora DSM 43833  Bacteria  normal  0.106866  normal 
 
 
-
 
NC_013510  Tcur_0130  PAS sensor protein  52.86 
 
 
451 aa  441  1e-123  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0725  putative methyl-accepting chemotaxis sensory transducer  31.45 
 
 
495 aa  148  2.0000000000000003e-34  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0580  hypothetical protein  36.45 
 
 
407 aa  141  3e-32  Ruegeria sp. TM1040  Bacteria  normal  0.376144  hitchhiker  0.000000596414 
 
 
-
 
NC_009429  Rsph17025_3590  glutathionylspermidine synthase  41.43 
 
 
423 aa  135  9.999999999999999e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0189919  normal  0.320323 
 
 
-
 
NC_007643  Rru_A2378  transcriptional regulator  36.78 
 
 
174 aa  125  1e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_4009  PAS  39.46 
 
 
172 aa  121  3e-26  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4792  putative PAS/PAC sensor protein  36.84 
 
 
174 aa  117  5e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3464  transcriptional regulator  38.73 
 
 
174 aa  115  1.0000000000000001e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1413  putative PAS/PAC sensor protein  41.33 
 
 
185 aa  115  1.0000000000000001e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.026067  normal 
 
 
-
 
NC_007778  RPB_1071  putative PAS/PAC sensor protein  44.93 
 
 
178 aa  114  3e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1312  putative PAS/PAC sensor protein  35.09 
 
 
174 aa  114  5e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.723682  normal  0.171791 
 
 
-
 
NC_013512  Sdel_0368  PAS sensor protein  41.54 
 
 
168 aa  112  1.0000000000000001e-23  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.580475  n/a   
 
 
-
 
NC_007958  RPD_1393  methyl-accepting chemotaxis sensory transducer  40 
 
 
182 aa  112  1.0000000000000001e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.959449 
 
 
-
 
NC_010730  SYO3AOP1_0920  putative PAS/PAC sensor protein  38.82 
 
 
170 aa  111  3e-23  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3908  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
174 aa  111  3e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4977  putative PAS/PAC sensor protein  42.03 
 
 
177 aa  110  4.0000000000000004e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.13761  n/a   
 
 
-
 
NC_013521  Sked_05500  PAS domain S-box  44.8 
 
 
194 aa  110  4.0000000000000004e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.414164  normal 
 
 
-
 
NC_009664  Krad_3403  PAS sensor protein  37.16 
 
 
189 aa  110  5e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.263742  normal  0.531721 
 
 
-
 
NC_011004  Rpal_4683  putative PAS/PAC sensor protein  43.57 
 
 
173 aa  110  6e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4975  putative PAS/PAC sensor protein  51.58 
 
 
178 aa  110  6e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.161434  n/a   
 
 
-
 
NC_013512  Sdel_0158  PAS sensor protein  38.69 
 
 
170 aa  110  7.000000000000001e-23  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00559927  n/a   
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  45.71 
 
 
522 aa  109  1e-22  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_2233  putative PAS/PAC sensor protein  36.76 
 
 
177 aa  108  1e-22  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.17522 
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  39.2 
 
 
538 aa  108  2e-22  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4662  putative PAS/PAC sensor protein  40.97 
 
 
168 aa  108  2e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.193201 
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  29.75 
 
 
522 aa  107  4e-22  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  40.15 
 
 
515 aa  106  9e-22  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  39.74 
 
 
549 aa  106  9e-22  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  42.52 
 
 
521 aa  105  1e-21  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.36 
 
 
522 aa  105  1e-21  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_003912  CJE1323  methyl-accepting chemotaxis protein  38.35 
 
 
165 aa  105  2e-21  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1204  methyl-accepting chemotaxis protein  38.35 
 
 
165 aa  105  2e-21  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1363  PAS  39.71 
 
 
544 aa  105  2e-21  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000284571 
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  45.16 
 
 
517 aa  105  2e-21  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009715  CCV52592_1962  methyl-accepting chemotaxis protein  40.31 
 
 
166 aa  104  3e-21  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.36 
 
 
522 aa  104  3e-21  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.14 
 
 
522 aa  103  5e-21  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  29.33 
 
 
533 aa  103  5e-21  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.36 
 
 
522 aa  103  5e-21  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  29.14 
 
 
522 aa  103  6e-21  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.27 
 
 
520 aa  103  7e-21  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2452  PAS  37.18 
 
 
518 aa  103  7e-21  Ralstonia eutropha JMP134  Bacteria  normal  0.952184  n/a   
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  29.47 
 
 
522 aa  103  8e-21  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  38.17 
 
 
522 aa  102  1e-20  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.55 
 
 
522 aa  102  1e-20  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  38.17 
 
 
522 aa  102  1e-20  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48 
 
 
716 aa  102  1e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  26.08 
 
 
519 aa  102  1e-20  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.54 
 
 
556 aa  101  2e-20  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  38.17 
 
 
522 aa  102  2e-20  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  40.8 
 
 
522 aa  101  3e-20  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.14 
 
 
521 aa  100  4e-20  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.96 
 
 
550 aa  101  4e-20  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.62 
 
 
524 aa  100  4e-20  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3295  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
519 aa  100  5e-20  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009707  JJD26997_0540  methyl-accepting chemotaxis protein  37.31 
 
 
166 aa  100  5e-20  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0729  PAS  49.06 
 
 
945 aa  100  6e-20  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_007298  Daro_0674  PAS  27.82 
 
 
544 aa  99.8  9e-20  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  37.98 
 
 
419 aa  99.8  1e-19  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40 
 
 
523 aa  99.4  1e-19  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.07 
 
 
522 aa  99  1e-19  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.26 
 
 
522 aa  99.8  1e-19  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  40.8 
 
 
569 aa  98.6  2e-19  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_009802  CCC13826_1233  methyl-accepting chemotaxis protein  37.04 
 
 
166 aa  99  2e-19  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  45.37 
 
 
521 aa  98.6  2e-19  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  46.39 
 
 
523 aa  99  2e-19  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  37.84 
 
 
565 aa  99  2e-19  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4064  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.78 
 
 
529 aa  97.8  3e-19  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3951  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.78 
 
 
529 aa  97.8  3e-19  Ralstonia pickettii 12J  Bacteria  normal  0.226395  normal 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.87 
 
 
521 aa  97.8  3e-19  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_010002  Daci_2372  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.89 
 
 
579 aa  97.8  4e-19  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  45.87 
 
 
521 aa  97.8  4e-19  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_008787  CJJ81176_1206  methyl-accepting chemotaxis protein  36.43 
 
 
164 aa  97.8  4e-19  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0044  putative PAS/PAC sensor protein  36.59 
 
 
162 aa  97.4  4e-19  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.34 
 
 
598 aa  97.8  4e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1520  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.86 
 
 
543 aa  97.4  5e-19  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.112151 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.59 
 
 
561 aa  97.4  5e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.26 
 
 
522 aa  97.4  5e-19  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2022  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.42 
 
 
748 aa  97.1  6e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.81 
 
 
566 aa  97.1  6e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_009714  CHAB381_1223  signal-transduction sensor protein  39.26 
 
 
189 aa  97.1  6e-19  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.658782  n/a   
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.87 
 
 
575 aa  96.7  7e-19  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_009078  BURPS1106A_A0387  aerotaxis sensor receptor  44.12 
 
 
514 aa  96.7  8e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0904499  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1814  aerotaxis receptor  44.12 
 
 
514 aa  96.7  8e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0801  methyl-accepting chemotaxis protein  44.12 
 
 
514 aa  96.7  8e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_2118  methyl-accepting chemotaxis protein  44.12 
 
 
514 aa  96.7  8e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  0.333375  n/a   
 
 
-
 
NC_007908  Rfer_0120  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.92 
 
 
519 aa  96.7  8e-19  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.83 
 
 
521 aa  96.7  8e-19  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009075  BURPS668_A0485  aerotaxis sensor receptor  44.12 
 
 
514 aa  96.7  8e-19  Burkholderia pseudomallei 668  Bacteria  normal  0.537813  n/a   
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  24.68 
 
 
520 aa  96.3  1e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.52 
 
 
521 aa  95.9  1e-18  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.13 
 
 
514 aa  95.9  1e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  38.52 
 
 
529 aa  96.3  1e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2125  methyl-accepting chemotaxis protein  44.12 
 
 
514 aa  95.9  1e-18  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  36.03 
 
 
524 aa  95.9  1e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_007298  Daro_0223  PAS  44.44 
 
 
1214 aa  95.1  2e-18  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.58 
 
 
524 aa  95.1  2e-18  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.18 
 
 
888 aa  95.1  2e-18  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  42.99 
 
 
532 aa  95.5  2e-18  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
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