More than 300 homologs were found in PanDaTox collection
for query gene Rcas_1967 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009767  Rcas_1967  response regulator receiver protein  100 
 
 		 141 aa  285  1e-76  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0246648  normal  1 
 
 
-
 
NC_009523  RoseRS_2709  response regulator receiver protein  81.95 
 
 		 135 aa  221  3e-57  Roseiflexus sp. RS-1  Bacteria  normal  0.755164  normal  1 
 
 
-
 
NC_011831  Cagg_0150  response regulator receiver protein  45.08 
 
 		 141 aa  128  3e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0560518  normal  0.0737587 
 
 
-
 
NC_009972  Haur_0965  response regulator receiver protein  41.46 
 
 		 128 aa  101  4e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00737627  n/a   
 
 
-
 
NC_009767  Rcas_0845  response regulator receiver modulated metal dependent phosphohydrolase  35.04 
 
 		 508 aa  85.1  3e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.903712  hitchhiker  0.00198769 
 
 
-
 
NC_009523  RoseRS_4041  response regulator receiver protein  39.02 
 
 		 127 aa  84.3  5e-16  Roseiflexus sp. RS-1  Bacteria  normal  0.557093  normal  1 
 
 
-
 
NC_002939  GSU1495  sigma-54 dependent DNA-binding response regulator  38.98 
 
 		 458 aa  83.6  9e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.301103  n/a   
 
 
-
 
NC_009767  Rcas_3669  response regulator receiver protein  37.93 
 
 		 127 aa  80.9  0.000000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_1397  two component, sigma54 specific, Fis family transcriptional regulator  36.44 
 
 		 458 aa  80.9  0.000000000000006  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  37.61 
 
 		 457 aa  80.5  0.000000000000008  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  34.19 
 
 		 513 aa  80.1  0.000000000000009  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.102838 
 
 
-
 
NC_009441  Fjoh_2880  two component transcriptional regulator  36.52 
 
 		 220 aa  78.2  0.00000000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  0.344114  n/a   
 
 
-
 
NC_009505  BOV_0603  DNA-binding response regulator  34.85 
 
 		 229 aa  78.2  0.00000000000004  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3065  response regulator receiver protein  35.77 
 
 		 128 aa  77  0.00000000000008  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.735156  hitchhiker  0.0000890784 
 
 
-
 
NC_009636  Smed_0630  two component transcriptional regulator  34.68 
 
 		 223 aa  77  0.00000000000009  Sinorhizobium medicae WSM419  Bacteria  normal  0.0672917  normal  1 
 
 
-
 
NC_011729  PCC7424_4628  two component transcriptional regulator, winged helix family  34.75 
 
 		 224 aa  76.6  0.0000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.000289587 
 
 
-
 
NC_007519  Dde_2355  two component Fis family transcriptional regulator  33.62 
 
 		 465 aa  75.5  0.0000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.658958  n/a   
 
 
-
 
NC_007908  Rfer_3523  two component transcriptional regulator  37.14 
 
 		 235 aa  75.5  0.0000000000002  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013161  Cyan8802_4261  two component transcriptional regulator, winged helix family  34.75 
 
 		 224 aa  75.1  0.0000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  0.906422  normal  0.0109867 
 
 
-
 
NC_007964  Nham_1433  two component transcriptional regulator  35.59 
 
 		 223 aa  75.1  0.0000000000003  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_4222  two component transcriptional regulator, winged helix family  34.75 
 
 		 224 aa  75.1  0.0000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009667  Oant_2674  two component transcriptional regulator  34.68 
 
 		 230 aa  75.1  0.0000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.238816  n/a   
 
 
-
 
NC_012918  GM21_1635  two component, sigma54 specific, transcriptional regulator, Fis family  35.04 
 
 		 457 aa  74.7  0.0000000000004  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011146  Gbem_0243  two component transcriptional regulator, winged helix family  32.33 
 
 		 224 aa  74.7  0.0000000000004  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000226454  n/a   
 
 
-
 
NC_009483  Gura_1986  two component heavy metal response transcriptional regulator  34.75 
 
 		 223 aa  74.7  0.0000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  0.0566795  n/a   
 
 
-
 
NC_013525  Tter_1435  two component transcriptional regulator, winged helix family  38.98 
 
 		 233 aa  74.7  0.0000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_3081  two component signal transduction response regulator  30.08 
 
 		 223 aa  74.3  0.0000000000005  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0227  two component transcriptional regulator, winged helix family  32.33 
 
 		 224 aa  74.3  0.0000000000005  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_010515  Bcenmc03_4228  Hpt sensor hybrid histidine kinase  37.5 
 
 		 1011 aa  74.3  0.0000000000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.339192 
 
 
-
 
NC_013512  Sdel_2139  response regulator receiver  35.71 
 
 		 236 aa  73.9  0.0000000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_4988  two component transcriptional regulator  33.06 
 
 		 225 aa  73.9  0.0000000000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  hitchhiker  0.000131605 
 
 
-
 
NC_004310  BR0604  DNA-binding response regulator  34.09 
 
 		 229 aa  73.9  0.0000000000007  Brucella suis 1330  Bacteria  normal  0.121209  n/a   
 
 
-
 
NC_011146  Gbem_2591  two component, sigma54 specific, transcriptional regulator, Fis family  34.19 
 
 		 457 aa  73.9  0.0000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  0.313706  n/a   
 
 
-
 
NC_008577  Shewana3_1340  two component, sigma54 specific, Fis family transcriptional regulator  36.89 
 
 		 446 aa  73.9  0.0000000000007  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.598769 
 
 
-
 
NC_011894  Mnod_4171  two component transcriptional regulator, winged helix family  30.65 
 
 		 225 aa  73.6  0.0000000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_4436  two component transcriptional regulator  30 
 
 		 227 aa  73.6  0.0000000000008  Methylobacterium sp. 4-46  Bacteria  normal  0.177006  normal  0.889846 
 
 
-
 
NC_014212  Mesil_3146  two component transcriptional regulator, winged helix family  37.61 
 
 		 218 aa  73.6  0.0000000000009  Meiothermus silvanus DSM 9946  Bacteria  normal  0.149495  normal  1 
 
 
-
 
NC_011146  Gbem_2521  two component, sigma54 specific, transcriptional regulator, Fis family  32.74 
 
 		 457 aa  73.6  0.0000000000009  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A1719  flagellar regulatory protein C  33.6 
 
 		 479 aa  73.6  0.0000000000009  Vibrio cholerae O395  Bacteria  normal  0.0473988  n/a   
 
 
-
 
NC_009485  BBta_3067  two component transcriptional regulator  34.75 
 
 		 224 aa  73.6  0.000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.43316  normal  1 
 
 
-
 
NC_013730  Slin_2944  two component transcriptional regulator, winged helix family  36.19 
 
 		 223 aa  73.6  0.000000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.470859  normal  0.70587 
 
 
-
 
NC_009720  Xaut_3176  two component transcriptional regulator  35.78 
 
 		 223 aa  73.2  0.000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.987704  normal  0.0233237 
 
 
-
 
NC_007575  Suden_0317  two component transcriptional regulator  33.05 
 
 		 224 aa  72.8  0.000000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_1478  two component transcriptional regulator  33.9 
 
 		 240 aa  73.2  0.000000000001  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000111909  normal  1 
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  35.29 
 
 		 396 aa  73.2  0.000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_4293  two component transcriptional regulator  32.33 
 
 		 224 aa  73.2  0.000000000001  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000934276  n/a   
 
 
-
 
NC_011004  Rpal_2126  two component transcriptional regulator, winged helix family  34.75 
 
 		 224 aa  72.8  0.000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.245988  n/a   
 
 
-
 
NC_012918  GM21_1698  two component, sigma54 specific, transcriptional regulator, Fis family  32.74 
 
 		 457 aa  73.2  0.000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000740904 
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  37.04 
 
 		 460 aa  72.8  0.000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_1187  two component transcriptional regulatory protein  34.75 
 
 		 223 aa  72  0.000000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_2015  two component hybrid sensor response regulator  34.68 
 
 		 391 aa  72.8  0.000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0528  two component heavy metal response transcriptional regulator  34.75 
 
 		 223 aa  72.4  0.000000000002  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_0434  two component transcriptional regulator, winged helix family  31.82 
 
 		 236 aa  72.8  0.000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.569156 
 
 
-
 
NC_007778  RPB_3454  two component transcriptional regulator  34.15 
 
 		 257 aa  72.8  0.000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.215717 
 
 
-
 
NC_013132  Cpin_0693  two component transcriptional regulator, winged helix family  32.33 
 
 		 229 aa  72  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_1997  winged helix family two component transcriptional regulator  34.75 
 
 		 224 aa  72.8  0.000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.981118  normal  1 
 
 
-
 
NC_009483  Gura_0085  two component, sigma-54 specific, Fis family transcriptional regulator  37.5 
 
 		 452 aa  72.8  0.000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_03164  hypothetical protein  33.6 
 
 		 469 aa  72.4  0.000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013158  Huta_0888  multi-sensor signal transduction histidine kinase  31.09 
 
 		 1045 aa  72  0.000000000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.628916  n/a   
 
 
-
 
NC_010581  Bind_2228  two component transcriptional regulator  34.86 
 
 		 235 aa  72  0.000000000003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013889  TK90_0242  two component transcriptional regulator, winged helix family  35.9 
 
 		 238 aa  71.6  0.000000000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.206504  normal  0.26673 
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  36.89 
 
 		 454 aa  72  0.000000000003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_0894  two component transcriptional regulator  33.08 
 
 		 222 aa  72  0.000000000003  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1280  two component, sigma54 specific, Fis family transcriptional regulator  36.97 
 
 		 446 aa  71.6  0.000000000003  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_1347  two component, sigma54 specific, Fis family transcriptional regulator  36.97 
 
 		 446 aa  71.6  0.000000000003  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_2296  two component transcriptional regulator  32.5 
 
 		 255 aa  71.6  0.000000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.398969  normal  0.240289 
 
 
-
 
NC_011663  Sbal223_1435  two component, sigma54 specific, transcriptional regulator, Fis family  36.07 
 
 		 447 aa  71.2  0.000000000004  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_0998  two component transcriptional regulator, winged helix family  33.33 
 
 		 223 aa  71.2  0.000000000004  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_1407  two component transcriptional regulator, winged helix family  30.77 
 
 		 225 aa  71.6  0.000000000004  Methylobacterium populi BJ001  Bacteria  normal  0.440596  normal  0.126744 
 
 
-
 
NC_009665  Shew185_2938  two component, sigma54 specific, Fis family transcriptional regulator  36.07 
 
 		 447 aa  71.2  0.000000000004  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_1685  two component transcriptional regulator, winged helix family  31.45 
 
 		 225 aa  71.6  0.000000000004  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00118059  normal  1 
 
 
-
 
NC_009997  Sbal195_3070  two component, sigma54 specific, Fis family transcriptional regulator  36.07 
 
 		 447 aa  71.2  0.000000000004  Shewanella baltica OS195  Bacteria  normal  1  normal  0.6792 
 
 
-
 
NC_009052  Sbal_2928  two component, sigma54 specific, Fis family transcriptional regulator  36.07 
 
 		 447 aa  71.2  0.000000000004  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_1411  response regulator receiver  31.45 
 
 		 225 aa  71.6  0.000000000004  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.110033 
 
 
-
 
NC_004347  SO_3230  flagellar regulatory protein C  36.89 
 
 		 446 aa  71.2  0.000000000005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_2104  two component transcriptional regulator, winged helix family  32.38 
 
 		 225 aa  71.2  0.000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.302064  normal  0.805943 
 
 
-
 
NC_011312  VSAL_I2310  sigma-54 dependent response regulator  32 
 
 		 478 aa  71.2  0.000000000005  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_1322  two component transcriptional regulator  37.96 
 
 		 239 aa  71.2  0.000000000005  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.596062 
 
 
-
 
NC_012034  Athe_0280  two component transcriptional regulator, winged helix family  33.9 
 
 		 225 aa  71.2  0.000000000005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_0196  two component transcriptional regulator  33.05 
 
 		 226 aa  71.2  0.000000000005  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_2266  two component transcriptional regulator  33.63 
 
 		 249 aa  71.2  0.000000000005  Mycobacterium gilvum PYR-GCK  Bacteria  decreased coverage  0.00896474  normal  1 
 
 
-
 
NC_007492  Pfl01_0202  two component heavy metal response transcriptional regulator  35.59 
 
 		 226 aa  70.9  0.000000000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_2551  response regulator receiver sensor signal transduction histidine kinase  34.45 
 
 		 396 aa  70.9  0.000000000006  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.14529e-19 
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  33.88 
 
 		 225 aa  70.9  0.000000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA2330  DNA-binding response regulator  33.9 
 
 		 228 aa  70.5  0.000000000007  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_1830  two component transcriptional regulator  34.86 
 
 		 229 aa  70.5  0.000000000007  Rhodopseudomonas palustris BisB18  Bacteria  hitchhiker  0.000334727  normal  0.705517 
 
 
-
 
NC_013158  Huta_1892  putative PAS/PAC sensor protein  28.46 
 
 		 632 aa  70.5  0.000000000007  Halorhabdus utahensis DSM 12940  Archaea  normal  0.487702  n/a   
 
 
-
 
NC_009972  Haur_3092  response regulator receiver protein  30.89 
 
 		 128 aa  70.5  0.000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0109887  n/a   
 
 
-
 
NC_011729  PCC7424_2752  multi-component transcriptional regulator, winged helix family  33.05 
 
 		 799 aa  70.5  0.000000000008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_013169  Ksed_21520  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  38.05 
 
 		 222 aa  70.5  0.000000000008  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0794896  hitchhiker  0.0000630157 
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  30.83 
 
 		 1139 aa  70.5  0.000000000008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.187038 
 
 
-
 
NC_002939  GSU0451  DNA-binding response regulator  28.57 
 
 		 224 aa  70.1  0.000000000009  Geobacter sulfurreducens PCA  Bacteria  normal  0.313098  n/a   
 
 
-
 
NC_010501  PputW619_1484  histidine kinase  34.43 
 
 		 785 aa  70.1  0.000000000009  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009484  Acry_2712  response regulator receiver protein  35.96 
 
 		 131 aa  70.1  0.000000000009  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_1956  two component transcriptional regulator  38.1 
 
 		 223 aa  69.7  0.00000000001  Polaromonas sp. JS666  Bacteria  decreased coverage  0.0000121146  normal  0.806146 
 
 
-
 
NC_009943  Dole_2394  response regulator receiver protein  32.11 
 
 		 126 aa  69.7  0.00000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1785  response regulator receiver protein  36.61 
 
 		 120 aa  69.3  0.00000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0637089  normal  0.834554 
 
 
-
 
NC_008699  Noca_2006  response regulator receiver  38.46 
 
 		 223 aa  70.1  0.00000000001  Nocardioides sp. JS614  Bacteria  normal  0.379718  n/a   
 
 
-
 
NC_008789  Hhal_1340  two component, sigma54 specific, Fis family transcriptional regulator  32.69 
 
 		 457 aa  70.1  0.00000000001  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_2578  two component, sigma54 specific, Fis family transcriptional regulator  34.43 
 
 		 446 aa  69.7  0.00000000001  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>