| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2006 |
|---|
| Symbol | |
|---|
| ID | 4598628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 2148057 |
|---|
| End bp | 2148728 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639776610 |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_923203 |
|---|
| Protein GI | 119716238 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.379718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCAGGA TCCTGATCGT CGAGGACGAG GAGCGGATCG CGTCGTTCCT GGCCAAGGGG
CTGCGCGCCG ACGGCCACGT GACGACCTGC GTGGCGGACG GCCGTGAGGG GCTCGACCTG
GCGCTCGGCG GCGACGTCGA CCTGGTCGTG CTCGACATCG GGCTGCCCGG GATGGACGGC
TTCGAGGTGC TCGACCAGCT GCGCTCCCAG GGCTCCACGG TCCCGGTCAT CGTGCTGACC
GCCCGCGACT CGGTCGGCGA CACCGTCTCC GCGCTCGAGG GCGGCGCCGA CGACTACATG
CCCAAGCCGT TCCGCTTCGC CGAGCTGCTC GCGAGGGTCC GGCTGCGGCT GCGGCAGAGC
GCCGACGCGG GCGGGGCGTC GCGAGAGGAC GTGCTGCAGT CCGGCCGGGT CAAGCTGGAC
GTACGGACCC GGCGCGCCGT GGTCGAGGAC CGGCAGGTCG ACCTGTCGGC CCGGGAGTTC
TCGCTCGCGG AGATCTTCAT GGTCAACGCC GGCCAGGTGC TCTCCCGCGA GCAGCTGCTC
GACCACGTCT GGGGGATGGA CTTCGACCCC GGCTCGAACG TGGTCGACGT GTACGTCGGC
TATCTGCGCA AGAAGCTCGG CGCCGACACC ATCGCCACCG TCCGGGGCAT GGGGTACCGC
TTCAACCGCT GA
|
|---|
| Protein sequence | MARILIVEDE ERIASFLAKG LRADGHVTTC VADGREGLDL ALGGDVDLVV LDIGLPGMDG
FEVLDQLRSQ GSTVPVIVLT ARDSVGDTVS ALEGGADDYM PKPFRFAELL ARVRLRLRQS
ADAGGASRED VLQSGRVKLD VRTRRAVVED RQVDLSAREF SLAEIFMVNA GQVLSREQLL
DHVWGMDFDP GSNVVDVYVG YLRKKLGADT IATVRGMGYR FNR
|
|---|
| |