| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0888 |
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| Symbol | |
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| ID | 8383161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 856228 |
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| End bp | 859365 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644971952 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_003129804 |
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| Protein GI | 257051971 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.628916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA CAGCCGAATC AGTCCGCATC CTCCACGTCG ACGACGACCC GGACTTTCTC
GATATCACGG CCGAATTTTT ACAGCGGGAA AACGAGCAGT TCACGGTCGA CGTTGCGACG
AGTGCCGCGG ATGGGTTGGA TCGCCTCACG GAGAATGCCT ACGACTGCAT CGTTTCGGAC
TACGAGATGC CGGGCCAAGA CGGGATCGAA TTTCTCAAAG CCGTTCGCAA GGACCACCCC
GACCTCCCGT TTGTCCTATA CACCGGCAAA GGAAGCGAGA CGATCGCCAG TGAGGCAATC
TCGGCCGGGG TGAGCGAGTA CCTCCAGAAG GGAAGCGGGA CCGATCAGTA CACGGTGCTT
GCCAACCGGA TCGAAAACCT CGTCTCCCGC CGCGAAGCCG AGATCACGGT CGCCCGGTAC
GACCAACGGG AGCGCGAAAG CGAGCGGTAT CGGCGGGAAC TTCTGGATAT CACCGCCGAT
CCGGACACCA CAACCGACGA GAAAGCCCAT CAGTTGCTCG AACTGGGCCG CGAGCGCCTC
GGGGCTGAGA ACGGCCATCT CGTCAAGATC GACGAGGATC GGAACCGACA CGAAGTGATC
AGCGTGACCG GGTCCGAAAT CGTCCAGAAG GGAGTAACCG ACCTCTCGAA AACGTACTGT
CGACAAACGA TCGACTCCGA CTCGATCTTC GACGTTCACG ACGCCCCAGG AGCTGGCTGG
GAGGACGATC CTGCCTACCA GCAATTCGAG TTGGGCTGTT ACATCGGCCG GAAACTGCTC
GTGGAGGGGG AGCTGTTCGG CACACTGTGT TACGTCAGCA GCGACCCGCG TGAGGAACCG
TTCACCAACG ACGAGAAGAC GTTCTTCGAG CTGCTCGCCC GGTGGTTCAC CCAATTGCTG
GAACGGAAAC GCTATCGGTG CCAGGCGGAG ACGGTGTTCG AACACGCCCA AGATGGGATC
TTCCTGATCG ACGTCAGCCC CGAGCAGCGG TTTCGGATCC GGCGGGTAAA TCGGGCGTAC
GAGGCACTGA CCGGCCACTC GACCAAGGAC ATCGAAGGGA AAAGCCCCAC CGACATCTAC
GGCGCTGACA TCGGGACCGA AATCGAGACC CAGTATCGTG AGTGCGTCGA CCGAGAAGAA
CCGATCGAAT ACGAAGTGGC GTTGCCGGTC GGTCCCCACG ACGAGCCCAG GCAGTTTCAC
ACGAAACTCG CACCCGTCGT CGAGGCGGGC ACGGTCGTCG AGCTCGTCGG TGCAACCAGA
GATGTTACCC AGCGCAAGGA ACGACAGTCG AAACTTGAAG CCGAGCGTGC GTTCATCGAG
GAAACACTCA ACAGCCTCGA AGATGTGCTA TACCTGATCA ATCCCGATGG CAGCCTCCGT
CGCTGGAACG ATCGCCTCGG TGCGGTGACC GGCTACGACG ACGAGGAGAT CGAGACGATG
GCGGCGACTG ACTTTTTCCC ACCAGAAGAA CGCGAGCGCA TCGCCGACGC GATCGACGAG
GCGCTTGCGA CTGGCAGGGC AGTCGTCGAG GCAGACGTCC TCACCGCCGC GGGGGAACGG
ACCCCCTACG AGTTCACCGG CACGCGATTG ACCGACTCGT CCGGCGACGT GCTCGGGGTG
GTCGGGATCG GCCGGGACAT CGCCGGCCAC AAGGAACGCG AACGCGAGCT CAGACAGTAC
CAGCAGATCC TCGACGCGAT GCTCGACCCG GCGACCGTCA TGAACGAGGA CGGGGAGTAC
ACTGTCGTCA ACAACGCGAT GGCAGCAGTC CACGAGATGC AGGCCGAAGA ACTGATCGGC
GAACCCAGCC CGTTCATCCG GGAGCTTCGC GAAGCGCGTT CGGACGACCC CTACCGGGAA
CTCGTCGATG GCGAACGCGA GGAGTATCGC GGGGAGTACA CGATGGAGAT CCCCGACGCC
GACCCCATCT ACTTCGAGTA TCGGCTCAGC CGGCTGACCA TCGACGGGCG CTTCTGTGGG
ATTGTCGCGG TGGGCCGTGA CGTCACCGAC CGGAAGCGCC GCGAGGAGAC GCTCGAAGCC
CTCCACAAAC GGACGCGCCC GTTCATCACG ACGCCGGATC AGGAGGTCGT TGCCGAGCAC
GCCGTCGAGA CGGTCGCCAG TGTCCTGGAC CAGGGGATCA ACACTGTCTG GCTCTACGAC
GAGGACAGCG AGACACTGGA ACCGGCCGCC TGGACCGACG CTGCCGCGGA GCTGCTGGGC
GAGATGCCGA GCTATACCGG CGAAGGAAGC CTCACGTGGG ACGCCTTCCG GAGCGGAGAG
GTACTGGTGA TCGACGAGAT GAGTACGGTG AACGGCCGGC ACAACCCCCA AACGCCGATC
CGGAGTGAAA TCATCCTCCC GCTGGGCGAG TACGGCGTAA TGAACATCGG ATCGACGGAA
CCGGACGCCT TCGAAGACAT CGACATCTCG CTCGCCCGTG TCCTCGGCGA CATGGTCGAA
GCAGCTCTCA TCCGGACGGA CCGGGAGGAG GAACTCCGCG ACAGACGTCG TGAGCTCGAA
CGCCAGAACG AGCGTCTCGA AGAGTTCGCC AGCCTCGTCA GCCACGACCT CCGCAACCCG
TTGAACGTCG CCGAGGCACG GGTCCAACTC GCCCTGGACG AGCGCGACAG CGAGCACCTG
GACGTCGCGG CGAAAGCGAT CGACCGAATG GGTGTCCTGA TCGACGATAT CCTTCAACTG
GCCCGGGAAG GCGAACGGAT CGACGAGATG GAACGCATCG ACCTCGAAAC GATCTGTGCC
GATTGCTGGG ACGCCGTCGA GACAACCGAG GCGACGCTAT CCGTCGAATC GAACCGGCCG
ATCCGTGCCG ACCGGAGCCG GGTTCGACAG CTGCTCGAGA ACCTCTTTCG AAACGCGGTC
GAACACGGGG GCGAAGACGT ACAGATCACG GTCGGTGCCC TGGAGGAGGG CTTTTTCGTC
GCCGACGACG GGCCGGGTAT CCCGCCGGAC GAACGAGAAA CCGTCTTCGA GAGTGGCTAT
ACGACCCGCG AGGACGGGAC CGGGTTCGGG CTCGCGATCG TCGCCGAGAT CGCCGACGCA
CACGGCTGGG ACGTCGCTGT GACCGACAGC GAGGACGGCG GCGCTCGCTT CGAGATCACC
GCCGTCGAAG CCCCGTAG
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| Protein sequence | MSETAESVRI LHVDDDPDFL DITAEFLQRE NEQFTVDVAT SAADGLDRLT ENAYDCIVSD
YEMPGQDGIE FLKAVRKDHP DLPFVLYTGK GSETIASEAI SAGVSEYLQK GSGTDQYTVL
ANRIENLVSR REAEITVARY DQRERESERY RRELLDITAD PDTTTDEKAH QLLELGRERL
GAENGHLVKI DEDRNRHEVI SVTGSEIVQK GVTDLSKTYC RQTIDSDSIF DVHDAPGAGW
EDDPAYQQFE LGCYIGRKLL VEGELFGTLC YVSSDPREEP FTNDEKTFFE LLARWFTQLL
ERKRYRCQAE TVFEHAQDGI FLIDVSPEQR FRIRRVNRAY EALTGHSTKD IEGKSPTDIY
GADIGTEIET QYRECVDREE PIEYEVALPV GPHDEPRQFH TKLAPVVEAG TVVELVGATR
DVTQRKERQS KLEAERAFIE ETLNSLEDVL YLINPDGSLR RWNDRLGAVT GYDDEEIETM
AATDFFPPEE RERIADAIDE ALATGRAVVE ADVLTAAGER TPYEFTGTRL TDSSGDVLGV
VGIGRDIAGH KERERELRQY QQILDAMLDP ATVMNEDGEY TVVNNAMAAV HEMQAEELIG
EPSPFIRELR EARSDDPYRE LVDGEREEYR GEYTMEIPDA DPIYFEYRLS RLTIDGRFCG
IVAVGRDVTD RKRREETLEA LHKRTRPFIT TPDQEVVAEH AVETVASVLD QGINTVWLYD
EDSETLEPAA WTDAAAELLG EMPSYTGEGS LTWDAFRSGE VLVIDEMSTV NGRHNPQTPI
RSEIILPLGE YGVMNIGSTE PDAFEDIDIS LARVLGDMVE AALIRTDREE ELRDRRRELE
RQNERLEEFA SLVSHDLRNP LNVAEARVQL ALDERDSEHL DVAAKAIDRM GVLIDDILQL
AREGERIDEM ERIDLETICA DCWDAVETTE ATLSVESNRP IRADRSRVRQ LLENLFRNAV
EHGGEDVQIT VGALEEGFFV ADDGPGIPPD ERETVFESGY TTREDGTGFG LAIVAEIADA
HGWDVAVTDS EDGGARFEIT AVEAP
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