Gene Rcas_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1967 
Symbol 
ID5539445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2517615 
End bp2518040 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content54% 
IMG OID640894102 
Productresponse regulator receiver protein 
Protein accessionYP_001432073 
Protein GI156741944 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0246648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA GGCAACCGCT TCGTATTCTG CTGATCGAAG ACGACAGCAT GATCGCCAGC 
ATTATTGCAA TAGGGCTGCG TATGCTTGGC GTGCCTTACC TGCTCGACAC CGCCTATTCC
GCCGAAGAAG GACTCGACCT GTTCGAGCAA CACCCCTACG ATCTCGTCAT GAGCGACTAC
AACCTGCGCG GGATGAACGG ATTGTCATTA CTGACCACTA TTCGGCAAAG TAAGCCGACA
ACGCCGACGG TGCTGTTTAC CGCATACGAC ACCCCACAGT TGCAGCGTCA GGCGCGCGAG
GCAGGCATCA ACGAATATAT TGCCAAACCG TTTCTGATCG AGGATTTCGT GAACCTTGCG
CGCAATCTGC TCCCTATCGC TGTCAATGAG ATCGGCGCCA GTTCCTCATA TACCAATGAC
GATTGA
 
Protein sequence
MSARQPLRIL LIEDDSMIAS IIAIGLRMLG VPYLLDTAYS AEEGLDLFEQ HPYDLVMSDY 
NLRGMNGLSL LTTIRQSKPT TPTVLFTAYD TPQLQRQARE AGINEYIAKP FLIEDFVNLA
RNLLPIAVNE IGASSSYTND D