Gene Mext_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1411 
Symbol 
ID5833860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1586805 
End bp1587482 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID641367211 
Productresponse regulator receiver 
Protein accessionYP_001638883 
Protein GI163850840 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.110033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCTGC TCGTGGTCGA GGATGACCGT GACATCAACC GGCAGGTCGT GGCCGCGTTG 
GAAGAGGCCG GCTACGTCGC CGACAAAGCC TTCGATGGCG AGGAGGGCGG CTATCTCGGC
GAGAACGAGC CCTATGACGC CATCATTCTC GACATGGGCC TGCCCAAGGC CGACGGCGTC
ACGGTGCTCC AGAACTGGCG CCGGGCCGGG GTGAAGACCC CCGTCATCAT CCTCACCGCC
CGCGACCGCT GGTCCGACAA GGTGGACGGC TTCGACGCGG GCGCCGACGA CTACGTCACC
AAGCCCTTCC ACATGGAGGA GCTGATGGCC CGCGTGCGCG CGATCCTTCG CCGCGCGGCG
GGCCACGCGT CGAGCCAGAT CGCCTGCGGC CCCGTCACCC TCGACACCCG CTCGGGTCGC
GTCTTCGTGG ACGGCGCCCC GATCAAGCTG ACGAGCCACG AATACCGGCT GCTCTCCTAC
CTGATGCACC ACACCGGCCG CGTCGTCTCC CGCGCCGAGT TGACCGAGCA TCTCTACGAC
CAGGATTTCG ACCGCGACTC CAACACCATC GAGGTGTTCG TCGGGCGCCT GAGGAAGAAG
CTCGCCGTGG ACCTGATCCA GACGGTGCGG GGGCTGGGCT ACCTGATTGA TCCGAACCAG
CCGCCGGGGC GGGCGTGA
 
Protein sequence
MRLLVVEDDR DINRQVVAAL EEAGYVADKA FDGEEGGYLG ENEPYDAIIL DMGLPKADGV 
TVLQNWRRAG VKTPVIILTA RDRWSDKVDG FDAGADDYVT KPFHMEELMA RVRAILRRAA
GHASSQIACG PVTLDTRSGR VFVDGAPIKL TSHEYRLLSY LMHHTGRVVS RAELTEHLYD
QDFDRDSNTI EVFVGRLRKK LAVDLIQTVR GLGYLIDPNQ PPGRA