More than 300 homologs were found in PanDaTox collection
for query gene Suden_0317 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_0317  two component transcriptional regulator  100 
 
 
224 aa  447  1e-125  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_3081  two component signal transduction response regulator  50.9 
 
 
223 aa  241  7.999999999999999e-63  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1478  two component transcriptional regulator  51.57 
 
 
240 aa  233  2.0000000000000002e-60  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000111909  normal 
 
 
-
 
NC_013512  Sdel_2039  response regulator receiver  51.58 
 
 
224 aa  228  4e-59  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0851  two component transcriptional regulator  52.04 
 
 
222 aa  223  2e-57  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4293  two component transcriptional regulator  49.11 
 
 
224 aa  222  3e-57  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000934276  n/a   
 
 
-
 
NC_002939  GSU0451  DNA-binding response regulator  47.32 
 
 
224 aa  221  6e-57  Geobacter sulfurreducens PCA  Bacteria  normal  0.313098  n/a   
 
 
-
 
NC_012918  GM21_0227  two component transcriptional regulator, winged helix family  48.21 
 
 
224 aa  220  9.999999999999999e-57  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_0243  two component transcriptional regulator, winged helix family  48.21 
 
 
224 aa  219  1.9999999999999999e-56  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000226454  n/a   
 
 
-
 
NC_008554  Sfum_2007  two component transcriptional regulator  51.36 
 
 
223 aa  219  1.9999999999999999e-56  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4757  two component heavy metal response transcriptional regulator  47.53 
 
 
223 aa  218  6e-56  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0878196  n/a   
 
 
-
 
NC_008543  Bcen2424_3410  two component heavy metal response transcriptional regulator  47.53 
 
 
223 aa  218  6e-56  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0280  two component transcriptional regulator, winged helix family  49.33 
 
 
225 aa  218  7e-56  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1986  two component heavy metal response transcriptional regulator  47.98 
 
 
223 aa  218  7.999999999999999e-56  Geobacter uraniireducens Rf4  Bacteria  normal  0.0566795  n/a   
 
 
-
 
NC_007517  Gmet_3383  two component transcriptional regulator  46.43 
 
 
224 aa  217  1e-55  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3349  two component heavy metal response transcriptional regulator  47.53 
 
 
223 aa  216  2e-55  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4106  two component heavy metal response transcriptional regulator  47.09 
 
 
223 aa  216  2e-55  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.971428 
 
 
-
 
NC_008391  Bamb_5186  two component heavy metal response transcriptional regulator  47.98 
 
 
223 aa  216  2e-55  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010070  Bmul_6295  two component heavy metal response transcriptional regulator  47.53 
 
 
223 aa  215  2.9999999999999998e-55  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.803537  normal  0.219108 
 
 
-
 
NC_007492  Pfl01_0202  two component heavy metal response transcriptional regulator  48.66 
 
 
226 aa  214  7e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5099  two component heavy metal response transcriptional regulator, winged helix family  45.25 
 
 
228 aa  214  8e-55  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0773075 
 
 
-
 
NC_010682  Rpic_1841  two component heavy metal response transcriptional regulator, winged helix family  44.8 
 
 
228 aa  213  1.9999999999999998e-54  Ralstonia pickettii 12J  Bacteria  normal  0.99331  hitchhiker  0.00000222676 
 
 
-
 
NC_011071  Smal_2165  two component heavy metal response transcriptional regulator, winged helix family  45.78 
 
 
232 aa  213  1.9999999999999998e-54  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.77286 
 
 
-
 
NC_008463  PA14_27810  putative two-component response regulator  44.44 
 
 
226 aa  213  1.9999999999999998e-54  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2348  putative two-component response regulator  44 
 
 
228 aa  212  3.9999999999999995e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  0.804247  n/a   
 
 
-
 
NC_010676  Bphyt_5224  two component heavy metal response transcriptional regulator, winged helix family  48.21 
 
 
225 aa  211  7e-54  Burkholderia phytofirmans PsJN  Bacteria  normal  0.57611  normal 
 
 
-
 
NC_003296  RSp0655  two component response regulator transcription regulator protein  44.89 
 
 
228 aa  211  7.999999999999999e-54  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.81937 
 
 
-
 
NC_011729  PCC7424_4284  two component transcriptional regulator, winged helix family  46.64 
 
 
227 aa  210  1e-53  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_1351  two component transcriptional regulator, winged helix family  45.95 
 
 
225 aa  209  2e-53  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00188361  unclonable  0.0000000206018 
 
 
-
 
NC_007912  Sde_1948  response regulator receiver domain-containing protein  44 
 
 
226 aa  209  2e-53  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.679676 
 
 
-
 
NC_008609  Ppro_2957  two component transcriptional regulator  47.3 
 
 
223 aa  209  2e-53  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000000406961  n/a   
 
 
-
 
NC_010002  Daci_0451  two component heavy metal response transcriptional regulator  44.44 
 
 
230 aa  209  3e-53  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1718  two component heavy metal response transcriptional regulator, winged helix family  44.8 
 
 
228 aa  209  3e-53  Ralstonia pickettii 12J  Bacteria  normal  0.348336  normal 
 
 
-
 
NC_010557  BamMC406_5744  two component heavy metal response transcriptional regulator  47.32 
 
 
225 aa  209  3e-53  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0360294  normal  0.749662 
 
 
-
 
NC_008392  Bamb_5988  two component heavy metal response transcriptional regulator  47.77 
 
 
225 aa  209  3e-53  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5335  two component heavy metal response transcriptional regulator, winged helix family  44.8 
 
 
228 aa  209  3e-53  Ralstonia pickettii 12D  Bacteria  normal  0.733276  normal  0.970872 
 
 
-
 
NC_010814  Glov_0998  two component transcriptional regulator, winged helix family  45.45 
 
 
223 aa  208  6e-53  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6987  two component heavy metal response transcriptional regulator  47.32 
 
 
225 aa  207  8e-53  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.67799  normal  0.586494 
 
 
-
 
NC_008060  Bcen_1505  two component heavy metal response transcriptional regulator  47.32 
 
 
225 aa  207  8e-53  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.228186  n/a   
 
 
-
 
NC_008544  Bcen2424_6324  two component heavy metal response transcriptional regulator  47.32 
 
 
225 aa  207  8e-53  Burkholderia cenocepacia HI2424  Bacteria  normal  0.313253  normal 
 
 
-
 
NC_010682  Rpic_1780  two component heavy metal response transcriptional regulator, winged helix family  43.89 
 
 
228 aa  207  1e-52  Ralstonia pickettii 12J  Bacteria  normal  0.817023  normal  0.826624 
 
 
-
 
NC_011831  Cagg_3502  two component transcriptional regulator, winged helix family  48.87 
 
 
232 aa  206  2e-52  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1389  two component heavy metal response transcriptional regulator  47.32 
 
 
225 aa  206  2e-52  Burkholderia xenovorans LB400  Bacteria  normal  0.717226  normal  0.091392 
 
 
-
 
NC_009767  Rcas_2599  two component transcriptional regulator  48.87 
 
 
232 aa  206  2e-52  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.268704  normal 
 
 
-
 
NC_007005  Psyr_1497  heavy metal response regulator  43.36 
 
 
228 aa  206  3e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1236  two component heavy metal response transcriptional regulator  45.21 
 
 
219 aa  205  4e-52  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3962  two component heavy metal response transcriptional regulator  46.88 
 
 
225 aa  205  4e-52  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2768  two component heavy metal response transcriptional regulator  47.53 
 
 
223 aa  205  5e-52  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1598  response regulator receiver  45.78 
 
 
226 aa  205  5e-52  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_5178  two component heavy metal response transcriptional regulator  43.44 
 
 
225 aa  205  5e-52  Pseudomonas putida W619  Bacteria  normal  0.341313  normal 
 
 
-
 
NC_011773  BCAH820_3235  DNA-binding response regulator  45.45 
 
 
224 aa  204  6e-52  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_002947  PP_5383  two component heavy metal response transcriptional regulator  43.44 
 
 
225 aa  204  7e-52  Pseudomonas putida KT2440  Bacteria  normal  normal  0.651671 
 
 
-
 
NC_010084  Bmul_2337  two component heavy metal response transcriptional regulator  43.56 
 
 
227 aa  204  9e-52  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0017  two component heavy metal response transcriptional regulator  42.99 
 
 
225 aa  204  1e-51  Pseudomonas putida F1  Bacteria  normal  normal  0.0468746 
 
 
-
 
NC_007298  Daro_2259  two component heavy metal response transcriptional regulator  44.8 
 
 
225 aa  204  1e-51  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B2033  DNA-binding response regulator  45.45 
 
 
224 aa  203  1e-51  Bacillus cereus G9842  Bacteria  normal  0.725953  normal 
 
 
-
 
NC_010501  PputW619_0017  two component heavy metal response transcriptional regulator  42.99 
 
 
225 aa  204  1e-51  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0019  two component heavy metal response transcriptional regulator  42.99 
 
 
225 aa  204  1e-51  Pseudomonas putida GB-1  Bacteria  normal  0.593373  normal 
 
 
-
 
NC_010184  BcerKBAB4_2944  two component transcriptional regulator  45.91 
 
 
224 aa  203  2e-51  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0958095  n/a   
 
 
-
 
NC_011725  BCB4264_A3221  DNA-binding response regulator  45 
 
 
224 aa  203  2e-51  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0537  two component transcriptional regulator, winged helix family  44.2 
 
 
224 aa  203  2e-51  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0716782  n/a   
 
 
-
 
NC_007347  Reut_A1815  two component heavy metal response transcriptional regulator  45 
 
 
224 aa  202  3e-51  Ralstonia eutropha JMP134  Bacteria  normal  0.275759  n/a   
 
 
-
 
NC_013730  Slin_2929  two component transcriptional regulator, winged helix family  44.64 
 
 
230 aa  202  4e-51  Spirosoma linguale DSM 74  Bacteria  normal  0.0551332  normal 
 
 
-
 
NC_005945  BAS2999  DNA-binding response regulator  44.55 
 
 
224 aa  201  9.999999999999999e-51  Bacillus anthracis str. Sterne  Bacteria  normal  0.227145  n/a   
 
 
-
 
NC_007530  GBAA_3229  DNA-binding response regulator  44.55 
 
 
224 aa  201  9.999999999999999e-51  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0130  two component transcriptional regulator, winged helix family  45.25 
 
 
224 aa  200  9.999999999999999e-51  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00147609  n/a   
 
 
-
 
NC_007973  Rmet_1751  two component heavy metal response transcriptional regulator  45.29 
 
 
224 aa  200  9.999999999999999e-51  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0784096 
 
 
-
 
NC_010682  Rpic_1760  two component heavy metal response transcriptional regulator, winged helix family  45.45 
 
 
225 aa  200  9.999999999999999e-51  Ralstonia pickettii 12J  Bacteria  normal  0.133831  normal  0.402692 
 
 
-
 
CP001637  EcDH1_3058  two component heavy metal response transcriptional regulator, winged helix family  42.22 
 
 
227 aa  199  1.9999999999999998e-50  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2552  two component transcriptional regulator, winged helix family  43.86 
 
 
230 aa  199  1.9999999999999998e-50  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.0000276879  normal  0.180215 
 
 
-
 
NC_009800  EcHS_A0618  DNA-binding transcriptional activator CusR  42.22 
 
 
227 aa  199  1.9999999999999998e-50  Escherichia coli HS  Bacteria  hitchhiker  0.000374882  n/a   
 
 
-
 
NC_009523  RoseRS_2290  two component transcriptional regulator  44.59 
 
 
224 aa  199  1.9999999999999998e-50  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_0651  DNA-binding transcriptional activator CusR  42.22 
 
 
227 aa  199  1.9999999999999998e-50  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.589216  normal 
 
 
-
 
NC_010468  EcolC_3075  DNA-binding transcriptional activator CusR  42.22 
 
 
227 aa  199  1.9999999999999998e-50  Escherichia coli ATCC 8739  Bacteria  normal  0.204173  normal 
 
 
-
 
NC_010498  EcSMS35_0588  DNA-binding transcriptional activator CusR  42.22 
 
 
227 aa  199  1.9999999999999998e-50  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  normal 
 
 
-
 
NC_013947  Snas_2104  two component transcriptional regulator, winged helix family  44.8 
 
 
225 aa  199  1.9999999999999998e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.302064  normal  0.805943 
 
 
-
 
CP001509  ECD_00532  DNA-binding response regulator in two-component regulatory system with CusS  42.22 
 
 
227 aa  199  3e-50  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3412  two component heavy metal response transcriptional regulator  43.84 
 
 
226 aa  199  3e-50  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3855  two component heavy metal response transcriptional regulator  41.96 
 
 
226 aa  199  3e-50  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.845216 
 
 
-
 
NC_012892  B21_00521  hypothetical protein  42.22 
 
 
227 aa  199  3e-50  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1026  two component transcriptional regulator  43.64 
 
 
224 aa  199  3e-50  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000442073 
 
 
-
 
NC_009512  Pput_3584  two component heavy metal response transcriptional regulator  41.52 
 
 
226 aa  199  3e-50  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_0589  DNA-binding transcriptional activator CusR  42.22 
 
 
227 aa  199  3e-50  Escherichia coli E24377A  Bacteria  normal  0.180273  n/a   
 
 
-
 
NC_008639  Cpha266_1205  two component transcriptional regulator  44.8 
 
 
222 aa  198  3.9999999999999996e-50  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1435  two component transcriptional regulator, winged helix family  46.82 
 
 
233 aa  199  3.9999999999999996e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_3739  two component transcriptional regulator, winged helix family  47.79 
 
 
266 aa  198  5e-50  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.453489  normal  0.0202921 
 
 
-
 
NC_010322  PputGB1_1699  two component heavy metal response transcriptional regulator  41.52 
 
 
226 aa  198  5e-50  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.00419772 
 
 
-
 
NC_003296  RSp0489  response regulator for cobalt zinc cadmium resistance transcription regulator protein  44.09 
 
 
224 aa  198  6e-50  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007971  Rmet_5978  regulatory protein CzcR  45.45 
 
 
225 aa  198  7e-50  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.0000269255  normal  0.0723212 
 
 
-
 
NC_008752  Aave_3002  two component transcriptional regulator  43.11 
 
 
230 aa  197  1.0000000000000001e-49  Acidovorax citrulli AAC00-1  Bacteria  normal  0.67465  normal  0.369251 
 
 
-
 
NC_013456  VEA_001641  putative two component response regulator transcription regulator protein  42.92 
 
 
230 aa  197  1.0000000000000001e-49  Vibrio sp. Ex25  Bacteria  normal  0.170142  n/a   
 
 
-
 
NC_013730  Slin_0919  two component transcriptional regulator, winged helix family  42.15 
 
 
223 aa  197  1.0000000000000001e-49  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.682864 
 
 
-
 
NC_002947  PP_2158  two component heavy metal response transcriptional regulator  41.07 
 
 
226 aa  197  2.0000000000000003e-49  Pseudomonas putida KT2440  Bacteria  normal  0.144347  normal  0.036827 
 
 
-
 
NC_010515  Bcenmc03_3842  two component heavy metal response transcriptional regulator  45.74 
 
 
227 aa  196  2.0000000000000003e-49  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.67414 
 
 
-
 
NC_012791  Vapar_3559  two component heavy metal response transcriptional regulator, winged helix family  45.29 
 
 
225 aa  196  2.0000000000000003e-49  Variovorax paradoxus S110  Bacteria  normal  0.710681  n/a   
 
 
-
 
NC_007908  Rfer_0422  two component heavy metal response transcriptional regulator  43.89 
 
 
227 aa  196  2.0000000000000003e-49  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_4683  two component heavy metal response transcriptional regulator  45.74 
 
 
228 aa  196  2.0000000000000003e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.222547  n/a   
 
 
-
 
NC_008543  Bcen2424_3680  two component heavy metal response transcriptional regulator  45.74 
 
 
228 aa  196  2.0000000000000003e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  0.224842  normal 
 
 
-
 
NC_011662  Tmz1t_3985  two component heavy metal response transcriptional regulator, winged helix family  43.18 
 
 
226 aa  196  3e-49  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1127  heavy metal response regulator  44.84 
 
 
225 aa  196  3e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.294376  normal  0.216529 
 
 
-
 
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