| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1892 |
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| Symbol | |
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| ID | 8384183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 1900644 |
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| End bp | 1902542 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644972960 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003130794 |
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| Protein GI | 257052961 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.487702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAGTC GTTCCGAAAC GATCCGGATT CTCCACGTCG ACGACGAGCC GGATCTCACC
GAGCTGGCCG CGACGTTTCT CGAACGGGAG GACGACCGAA TCGTGGTCGA AACCGCGTCG
AGCGCCGCGG ACGGTCTGGA TGTCCTGGAC GACTTCGCGG CCGACTGTAT CGTTTCGGAT
TACGACATGC CCGGGCGAAA CGGTATCGAA TTTCTCAAAG CCGTCCGTGA GCGCCACCCG
GAGTTACCCG TCATCCTCTA TACTGGCAAA GGATCAGAAG AAGTCGCCAG TGAGGCGATC
TCCGCCGGTG TGACCGAGTA CATGCAAAAG GAAGCCGGGA CTGACCAGTA CACCGTGCTG
GCGAATCGTA TCACCAATAG CGTCGAACAA TATCGTGCCC GTCAGGCGGC CGAACGGACG
CGCGAGCGAC TGACGGAGCT CTCCGAAAGC ACGACGGACT GTCTGTGGAT GTTCGACCGC
GAGTGGGAGG AACTCGTCTT CATCTCCGGC TACGAGGACG TCTGGAACCG GTCGGAATCC
GCTATCCGGG ACGACCCACG GGACTTCCTG TACGGCGTCC ATCCGGACGA TCGAGCGCTC
GTCGAAGACG CTATGGCCCG CCTCTCGAAC GGCGAGACGA TCGACGTCGA GTTCCGGATC
CTGCGTGGCG ACGACGATCC GGGCGCGGTG TGGATGAAGG GTGAACCCGT CCGCGACGAC
GAAGGGGCCG TCGTCCGGGT CGTCGGGTTC ACTCGCGACA TCACCGAGCG GCGAGAGCAG
CGCCGGCGGC TGGAAACGCT GATCAGCAAC CTCCCCGGCA TCGCCTATCG GTGTCGCAAC
GAACCCGGCT GGCCGATGGA GTTTGTCCGT GGGGAATGCG AAACTCTCAC CGGATATACT
GCCGACGCCA TCGAGCGCGG CGACGTCGAC TGGAGCGAGG ACGTTCTGCA TCCGGAAGAC
AGCGAGGACA TGTGGAACCG CGTCCAGGAC GCTGTCGACG CCGACCGACC GTTCGAGGTC
ACGTATCGCA TTCGAACGAA AGACGGTGAT ACCAGATGGA TGTGGGAGCG GGGGCAGATG
GTCGACGCCA CCGGACAGGA TACCGAGATA CTGGAGGGGT TTATCACCGA CATCACCGAG
CGAAGGCGAC GGGAGCGCGA ACTCGAACGG TACGAGGCCT ATCTTCAGGA GTCGACGGAC
ATCATCACCG TGCTCGATGC GGACGGGACG GTCAAGTACC AGAGTCCCGC AGTCACGCGA
ATCCTGGGGT ACGAGCCGGG AGAACTACTG GGAAAGAGCG GATTCGACTA CGTCCACCCC
GAGGACGTGG ATACGGTTAG GGCCGCGTTC GCCGAACTCG CCGGCGAGCC CGAGGGGACC
ATCACCGTCG AGTGTCGGTT TCGCACGGCC GACGGCGGGT GGCGCTGGCT CGAGGTCAAC
GGCTCGAACC AGCTCGACAC GGAGCCGATC AACGGGATCG TCACGAACAA CCGCGACATC
ACCGACCGGA AGAAACGCGA GCAGGAACTC GAATCCATCC TCCACGAGAT GGACGACGCC
ATCTTCGTTC ACCCCGATGG CGGGCCGTTT ACGTTCGTCA ATCAAGCTGC CGTCGAACGG
TACGGCTACA CGGAAGCGGA ACTCCACACG ATGACCCCCG CGGACCTCAA CGTGCCATCG
GAACCGGGCG AGGTAGCTGA GCGCGTCCAG GCAGTCATGG CGTCCGGCCA GGCGGTGTTC
GAAACCGAGC ACCGAACCCG ATCCGGGGAG ACGATTCCCG TCGAGATCAA CGCGACGACA
GTCACGTTCC ACGGGGACCG GTCGATCCTG TCGATAGTCC GGGACATCAG TGAGCGGAAA
TCGACCGAGC ACGAGTCCCA GAGGCCAAAC CGGGATTAG
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| Protein sequence | MVSRSETIRI LHVDDEPDLT ELAATFLERE DDRIVVETAS SAADGLDVLD DFAADCIVSD
YDMPGRNGIE FLKAVRERHP ELPVILYTGK GSEEVASEAI SAGVTEYMQK EAGTDQYTVL
ANRITNSVEQ YRARQAAERT RERLTELSES TTDCLWMFDR EWEELVFISG YEDVWNRSES
AIRDDPRDFL YGVHPDDRAL VEDAMARLSN GETIDVEFRI LRGDDDPGAV WMKGEPVRDD
EGAVVRVVGF TRDITERREQ RRRLETLISN LPGIAYRCRN EPGWPMEFVR GECETLTGYT
ADAIERGDVD WSEDVLHPED SEDMWNRVQD AVDADRPFEV TYRIRTKDGD TRWMWERGQM
VDATGQDTEI LEGFITDITE RRRRERELER YEAYLQESTD IITVLDADGT VKYQSPAVTR
ILGYEPGELL GKSGFDYVHP EDVDTVRAAF AELAGEPEGT ITVECRFRTA DGGWRWLEVN
GSNQLDTEPI NGIVTNNRDI TDRKKREQEL ESILHEMDDA IFVHPDGGPF TFVNQAAVER
YGYTEAELHT MTPADLNVPS EPGEVAERVQ AVMASGQAVF ETEHRTRSGE TIPVEINATT
VTFHGDRSIL SIVRDISERK STEHESQRPN RD
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