Gene Ksed_21520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_21520 
Symbol 
ID8373656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2226876 
End bp2227544 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content71% 
IMG OID644992398 
Productresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain 
Protein accessionYP_003149904 
Protein GI256825944 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.0794896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000630157 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCCCACA TCCTGATCAT CGAGGACAAC GACCGGATTG CCTCCTTCAT CGACAAGGGG 
CTGCGTGCCG CCGGATACCA GACCGAGGTG GTCGGCGACG GCCGCACCGG ACTGACGCTG
GCCATGCACG GCGGCTTCGA CCTCGTGGTG CTCGATCTGG GCCTGCCCGG CATGGACGGC
ACCGACCTGC TGGAGAACCT GCGCGGGCAG GGCGTCTCGG TGCCCGTCGT GGTCCTCACC
GCCCGGGACA CGGTGGAGGA CACCGTCTCC GCGCTGGAGG GCGGCGCGAA CGACTACATG
ACCAAGCCCT TCCAGTTCGC CGAGCTGCTG GCCCGCGTGC GGGTCCGTCT GGCCGACACC
ACCGAGGTGC CCACGGCGAA GGACGGCATG GTCGTGGAGG CCGGCGGCCT GGCCCTGGAC
CACCGCACCC GCGAGGTCCG CGGCGACGGC GTGCAGACCT CCCTGACCTC CCGCGAGTTC
GGCCTGTTGG CCACCTTCAT GCGCCACCCG GGCCAGGTGC TGAGCCGCCA GCAGCTGCTG
GCGGAGGTGT GGGGCGTGGA CCACGACCCC CACTCCAACG TGGTCGACGT CTGCGTGCGC
CAGCTGCGCA CCAAGGTGGG CAGCGACCAC ATCGAGACGG TCCGCGGCGT CGGCTACCGC
TTCCGCTGA
 
Protein sequence
MPHILIIEDN DRIASFIDKG LRAAGYQTEV VGDGRTGLTL AMHGGFDLVV LDLGLPGMDG 
TDLLENLRGQ GVSVPVVVLT ARDTVEDTVS ALEGGANDYM TKPFQFAELL ARVRVRLADT
TEVPTAKDGM VVEAGGLALD HRTREVRGDG VQTSLTSREF GLLATFMRHP GQVLSRQQLL
AEVWGVDHDP HSNVVDVCVR QLRTKVGSDH IETVRGVGYR FR