More than 300 homologs were found in PanDaTox collection
for query gene RPC_4869 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_4869  response regulator receiver domain-containing protein  100 
 
 		 123 aa  237  4e-62  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.337506  normal  0.697748 
 
 
-
 
NC_011004  Rpal_5220  response regulator receiver protein  77.24 
 
 		 126 aa  189  1e-47  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.472283  n/a   
 
 
-
 
NC_007964  Nham_0665  response regulator receiver domain-containing protein  79.67 
 
 		 127 aa  186  7e-47  Nitrobacter hamburgensis X14  Bacteria  normal  0.709306  n/a   
 
 
-
 
NC_007406  Nwi_0574  response regulator receiver  78.69 
 
 		 130 aa  185  2e-46  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.4385  normal  1 
 
 
-
 
NC_007958  RPD_0941  response regulator receiver  77.24 
 
 		 125 aa  185  2e-46  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_1174  putative two-component response regulator  74.59 
 
 		 126 aa  180  5.0000000000000004e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.289144  normal  0.876478 
 
 
-
 
NC_007778  RPB_0832  response regulator receiver domain-containing protein  78.57 
 
 		 125 aa  175  2e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.155773  normal  0.875827 
 
 
-
 
NC_010505  Mrad2831_3997  response regulator receiver protein  66.12 
 
 		 121 aa  154  3e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0883649 
 
 
-
 
NC_010511  M446_2198  response regulator receiver protein  61.48 
 
 		 127 aa  149  8.999999999999999e-36  Methylobacterium sp. 4-46  Bacteria  normal  0.16592  normal  0.62826 
 
 
-
 
NC_010725  Mpop_2980  response regulator receiver protein  62.81 
 
 		 121 aa  149  1e-35  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_2860  response regulator receiver  62.81 
 
 		 121 aa  148  2e-35  Methylobacterium extorquens PA1  Bacteria  normal  0.388237  normal  1 
 
 
-
 
NC_011757  Mchl_3086  response regulator receiver protein  62.81 
 
 		 121 aa  148  2e-35  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.342425  normal  1 
 
 
-
 
NC_011894  Mnod_1157  response regulator receiver protein  59.84 
 
 		 127 aa  143  7.0000000000000006e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.116971  n/a   
 
 
-
 
NC_011369  Rleg2_3569  response regulator receiver protein  61.16 
 
 		 119 aa  131  1.9999999999999998e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.146165 
 
 
-
 
NC_011989  Avi_4023  two component response regulator  57.85 
 
 		 119 aa  129  1.0000000000000001e-29  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_3862  response regulator receiver protein  57.85 
 
 		 119 aa  128  3e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.762525  normal  0.105944 
 
 
-
 
NC_009636  Smed_2540  response regulator receiver protein  63.64 
 
 		 119 aa  124  5e-28  Sinorhizobium medicae WSM419  Bacteria  normal  0.676292  normal  1 
 
 
-
 
NC_009719  Plav_1598  response regulator receiver protein  50.4 
 
 		 127 aa  121  3e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_3094  response regulator receiver protein  52.89 
 
 		 121 aa  119  9.999999999999999e-27  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_0513  multi-sensor hybrid histidine kinase  41.53 
 
 		 803 aa  84  6e-16  Sphingomonas wittichii RW1  Bacteria  normal  0.883754  normal  1 
 
 
-
 
NC_007794  Saro_1446  multi-sensor hybrid histidine kinase  39.67 
 
 		 811 aa  83.6  8e-16  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  35.83 
 
 		 465 aa  81.3  0.000000000000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2507  response regulator receiver protein  40.5 
 
 		 121 aa  81.3  0.000000000000004  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013173  Dbac_2666  two component, sigma54 specific, transcriptional regulator, Fis family  39.34 
 
 		 459 aa  78.2  0.00000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_007520  Tcr_0754  response regulator receiver domain-containing protein  40.16 
 
 		 120 aa  78.6  0.00000000000003  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0520  multi-sensor signal transduction histidine kinase  40.17 
 
 		 556 aa  78.2  0.00000000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.936608  normal  0.731504 
 
 
-
 
NC_009719  Plav_1998  response regulator receiver protein  44.35 
 
 		 120 aa  78.2  0.00000000000004  Parvibaculum lavamentivorans DS-1  Bacteria  hitchhiker  0.00000230643  normal  1 
 
 
-
 
NC_007912  Sde_3108  response regulator receiver domain-containing protein  41.32 
 
 		 120 aa  77  0.00000000000008  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_0504  two component, sigma54 specific, Fis family transcriptional regulator  37.4 
 
 		 443 aa  75.5  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_0831  multi-sensor hybrid histidine kinase  34.51 
 
 		 957 aa  76.3  0.0000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5134  response regulator receiver protein  34.15 
 
 		 122 aa  75.1  0.0000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0135031  n/a   
 
 
-
 
NC_010814  Glov_1745  response regulator receiver sensor signal transduction histidine kinase  36.97 
 
 		 417 aa  75.1  0.0000000000003  Geobacter lovleyi SZ  Bacteria  normal  0.0330192  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  37.07 
 
 		 462 aa  75.1  0.0000000000003  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_009972  Haur_0852  GAF sensor hybrid histidine kinase  35 
 
 		 1055 aa  75.1  0.0000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  37.19 
 
 		 516 aa  74.7  0.0000000000004  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  31.62 
 
 		 457 aa  74.7  0.0000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_1397  two component, sigma54 specific, Fis family transcriptional regulator  35.9 
 
 		 458 aa  74.7  0.0000000000004  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  35.04 
 
 		 462 aa  74.7  0.0000000000004  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000025661  n/a   
 
 
-
 
NC_010571  Oter_1278  two component, sigma54 specific, Fis family transcriptional regulator  36.36 
 
 		 452 aa  74.3  0.0000000000005  Opitutus terrae PB90-1  Bacteria  normal  0.902353  normal  1 
 
 
-
 
NC_011884  Cyan7425_0981  two component transcriptional regulator, LuxR family  37.29 
 
 		 221 aa  74.3  0.0000000000005  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.416641 
 
 
-
 
NC_011891  A2cp1_0533  two component, sigma54 specific, transcriptional regulator, Fis family  36.59 
 
 		 443 aa  73.9  0.0000000000007  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.141325  n/a   
 
 
-
 
NC_011658  BCAH187_A5514  sporulation initiation phosphotransferase F  33.33 
 
 		 122 aa  73.6  0.0000000000008  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000170867  n/a   
 
 
-
 
NC_003909  BCE_5466  stage 0 sporulation protein F  33.33 
 
 		 122 aa  73.6  0.0000000000008  Bacillus cereus ATCC 10987  Bacteria  normal  0.0750811  n/a   
 
 
-
 
NC_005945  BAS5185  stage 0 sporulation protein F  33.33 
 
 		 122 aa  73.6  0.0000000000008  Bacillus anthracis str. Sterne  Bacteria  normal  0.0413406  n/a   
 
 
-
 
NC_005957  BT9727_5020  stage 0 sporulation protein F  33.33 
 
 		 122 aa  73.6  0.0000000000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000180816  n/a   
 
 
-
 
NC_006274  BCZK5036  stage 0 sporulation protein F  33.33 
 
 		 122 aa  73.6  0.0000000000008  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000000486089  n/a   
 
 
-
 
NC_007530  GBAA_5581  stage 0 sporulation protein F  33.33 
 
 		 122 aa  73.6  0.0000000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0132264  n/a   
 
 
-
 
NC_011725  BCB4264_A5459  sporulation initiation phosphotransferase F  33.33 
 
 		 122 aa  73.6  0.0000000000008  Bacillus cereus B4264  Bacteria  hitchhiker  0.000856307  n/a   
 
 
-
 
NC_011773  BCAH820_5429  sporulation initiation phosphotransferase F  33.33 
 
 		 122 aa  73.6  0.0000000000008  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.26925e-31 
 
 
-
 
NC_011145  AnaeK_0537  two component, sigma54 specific, transcriptional regulator, Fis family  36.59 
 
 		 446 aa  73.6  0.0000000000008  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_0343  response regulator receiver  37.5 
 
 		 232 aa  73.6  0.0000000000009  Thermobifida fusca YX  Bacteria  normal  0.86362  n/a   
 
 
-
 
NC_008554  Sfum_3564  response regulator receiver modulated metal dependent phosphohydrolase  36.21 
 
 		 492 aa  73.6  0.0000000000009  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B5493  sporulation initiation phosphotransferase F  33.33 
 
 		 122 aa  73.6  0.000000000001  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000162821  unclonable  2.17721e-26 
 
 
-
 
NC_013946  Mrub_1260  response regulator receiver protein  38.71 
 
 		 331 aa  73.2  0.000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.208704  normal  1 
 
 
-
 
NC_007794  Saro_1287  response regulator receiver domain-containing protein  38.74 
 
 		 127 aa  72.8  0.000000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.442215  n/a   
 
 
-
 
NC_011769  DvMF_2109  two component, sigma54 specific, transcriptional regulator, Fis family  36.89 
 
 		 515 aa  73.2  0.000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_009972  Haur_1267  response regulator receiver sensor signal transduction histidine kinase  37.93 
 
 		 542 aa  73.6  0.000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_3857  response regulator receiver protein  32.52 
 
 		 122 aa  73.2  0.000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.161717  n/a   
 
 
-
 
NC_007406  Nwi_0114  Signal transduction histidine kinase  41.03 
 
 		 939 aa  72.4  0.000000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  0.153209 
 
 
-
 
NC_007498  Pcar_2145  two component signal transduction response regulator  33.33 
 
 		 492 aa  72.4  0.000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3334  response regulator receiver protein  32.79 
 
 		 120 aa  72.4  0.000000000002  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_03275  two-component system, transcriptional regulatory protein  33.64 
 
 		 234 aa  72.8  0.000000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_0879  two component, sigma54 specific, transcriptional regulator, Fis family  34.43 
 
 		 466 aa  72  0.000000000002  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_0833  two component, sigma54 specific, Fis family transcriptional regulator  35.25 
 
 		 466 aa  72.4  0.000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.96038  n/a   
 
 
-
 
NC_008554  Sfum_2092  two component, sigma54 specific, Fis family transcriptional regulator  28.93 
 
 		 462 aa  72.4  0.000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.131918 
 
 
-
 
NC_009767  Rcas_1273  multi-sensor signal transduction histidine kinase  38.46 
 
 		 556 aa  72  0.000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.12815  normal  0.758765 
 
 
-
 
NC_002939  GSU1495  sigma-54 dependent DNA-binding response regulator  36.21 
 
 		 458 aa  71.6  0.000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  0.301103  n/a   
 
 
-
 
NC_011071  Smal_1031  PAS/PAC sensor hybrid histidine kinase  40.17 
 
 		 689 aa  71.6  0.000000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_3738  response regulator receiver modulated metal dependent phosphohydrolase  37.17 
 
 		 384 aa  72  0.000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0436  response regulator receiver protein  32.28 
 
 		 370 aa  72  0.000000000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008820  P9303_01831  two-component response regulator  39.67 
 
 		 290 aa  71.6  0.000000000003  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  1 
 
 
-
 
NC_009767  Rcas_2148  multi-sensor hybrid histidine kinase  39.02 
 
 		 819 aa  71.2  0.000000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.233006  hitchhiker  0.00949178 
 
 
-
 
NC_010338  Caul_0863  response regulator receiver protein  39.67 
 
 		 118 aa  71.6  0.000000000004  Caulobacter sp. K31  Bacteria  normal  1  normal  0.385882 
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  33.88 
 
 		 508 aa  71.6  0.000000000004  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal  1 
 
 
-
 
NC_008816  A9601_18291  two-component response regulator  37.5 
 
 		 248 aa  71.6  0.000000000004  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.276613  n/a   
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  36.7 
 
 		 231 aa  70.9  0.000000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_009483  Gura_2934  response regulator receiver protein  29.73 
 
 		 129 aa  70.9  0.000000000005  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000852899  n/a   
 
 
-
 
NC_007908  Rfer_2738  response regulator receiver domain-containing protein  36.44 
 
 		 194 aa  70.9  0.000000000005  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.000186206  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  34.17 
 
 		 237 aa  70.9  0.000000000005  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_4844  two component transcriptional regulator  36.7 
 
 		 231 aa  70.9  0.000000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.312171 
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  36.67 
 
 		 458 aa  70.9  0.000000000006  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  36.67 
 
 		 458 aa  70.9  0.000000000006  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_007577  PMT9312_1712  two component transcriptional regulator  36.67 
 
 		 248 aa  70.5  0.000000000007  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_009091  P9301_18111  two-component response regulator  36.67 
 
 		 248 aa  70.5  0.000000000007  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  35.65 
 
 		 480 aa  70.5  0.000000000007  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_009675  Anae109_2379  two component, sigma54 specific, Fis family transcriptional regulator  38.71 
 
 		 446 aa  70.5  0.000000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.373235  normal  0.0399931 
 
 
-
 
NC_010814  Glov_3603  response regulator receiver protein  28.1 
 
 		 131 aa  70.5  0.000000000007  Geobacter lovleyi SZ  Bacteria  normal  0.656399  n/a   
 
 
-
 
NC_011146  Gbem_3634  response regulator receiver sensor signal transduction histidine kinase  36.97 
 
 		 379 aa  70.5  0.000000000008  Geobacter bemidjiensis Bem  Bacteria  normal  0.0261897  n/a   
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  36.04 
 
 		 230 aa  70.5  0.000000000008  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.354926 
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  36.04 
 
 		 230 aa  70.5  0.000000000008  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  36.04 
 
 		 230 aa  70.5  0.000000000008  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal  1 
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  32.79 
 
 		 458 aa  70.1  0.000000000009  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  33.61 
 
 		 473 aa  70.1  0.000000000009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_007513  Syncc9902_0153  two component transcriptional regulator  36.67 
 
 		 253 aa  70.1  0.000000000009  Synechococcus sp. CC9902  Bacteria  normal  0.711737  n/a   
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  33.61 
 
 		 473 aa  70.1  0.000000000009  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_009767  Rcas_3604  putative PAS/PAC sensor protein  38.14 
 
 		 619 aa  70.1  0.00000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.562878 
 
 
-
 
NC_011145  AnaeK_0445  two component, sigma54 specific, transcriptional regulator, Fis family  31.97 
 
 		 481 aa  69.3  0.00000000001  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2248  response regulator receiver protein  37.5 
 
 		 121 aa  69.3  0.00000000001  Shewanella baltica OS185  Bacteria  normal  0.426629  n/a   
 
 
-
 
NC_011891  A2cp1_0883  two component, sigma54 specific, transcriptional regulator, Fis family  34.43 
 
 		 466 aa  69.7  0.00000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.879866  n/a   
 
 
-
 
NC_008819  NATL1_20711  two-component response regulator  34.71 
 
 		 246 aa  69.7  0.00000000001  Prochlorococcus marinus str. NATL1A  Bacteria  normal  1  normal  1 
 
 
-
 
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